Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0577 ATGGATTCAGAAGATCTTCAAGCTATTCTCCAAAGTTTTGAAGAGGCTCTGTTCATTGAAAATGAAGACGTGGTGCCAGAGACTGCAACAAATCAGCTGGCTGATCAAGTTCCTTCCACGTGCTCAAACACTTGGCCCTCCAACTACAATTCAGAGTATCATATGCCATTGAACATAGATCTACCCAATAATATCTCATGCCCTATTCCAGCTGTGGATCATCAAAACCAACTGATTCCTCATTCTAATGTTCCAATGCATCATCAGAGTGAAGGGGTGACAGAAACACCAATTCAAGAAGCCAATCGTGCTCGTCATGAATACTTTTATCATCAAACTAACCCTATGGATCATCACAACCAGATTCCTCATTCAGATGTTCCAATACATCATCAGAGTGAAGTGGTGAGGGAGGCACCGGTTCAAGTAGTTAGTCATGCTCAGGAATGCTTCTATCATCAAATTGACCCTATAGATCAGAACCAGATTCCTAATTCAACTACTCAACACCATACTATTCCTTCAAGATCAATTCTTCCCAAGCCTTCAATACATCAATTTGACCCACAAAGTCTTTCAAATGTTCCAATGAATCAGCCACAACCATTAAATAATTATCAATATAACTCCCAAATTCCTTATGATTTCCCAGTACACAAGTCACCTCCAATGGATGAATTCAACCCACAAGTTCTTTCACCTGTTCCACTGCAAATGCAACTTCCTATGAATCAATTTAACCTACAAAATATCACACAATTGACCCCAAGCATGCCGTCAGGATTGGTCAACCAGCAACCATATCACATGTCACCAAGGATGACAATGTTCCCTAAGTTTCCATCATCAGGCCCTTTTCATGCTACTCATTCAACTCCTCAAAACCACATTGTTCATCATGTTCCTCCAATACATCAATGGAATAGACAAAATCCATCTAATGTTGTTCAATATAACCCACAGCCACTAATCTCACCAGAGTTTTCATCAGACCCTTGGCTCTCTAATAGGCAACACTTGGTGAATCAACCTTCCTTTAACTCAGAAGCACCAATAAATATTGATCAAACCGATACCAAGGGAAAGTTATGGAGCAAAGAAGAACACAAGAAATTTCTGATGGGATTGCGAATATATGGGAAGGGAAAATGGAAGGAAATTTCACAATATGTGGAGACAAGGACATCAATTCAGATTGGTAGCCATGCTCAGAAATACTTTGAGCACCAAACTAGGGAAGGAAATAAAAAAAGAAAAAGAAAAAGCATCAATGATATCACCGATCCTGATGCTTTTCCCTGA 1302 0.3963 MDSEDLQAILQSFEEALFIENEDVVPETATNQLADQVPSTCSNTWPSNYNSEYHMPLNIDLPNNISCPIPAVDHQNQLIPHSNVPMHHQSEGVTETPIQEANRARHEYFYHQTNPMDHHNQIPHSDVPIHHQSEVVREAPVQVVSHAQECFYHQIDPIDQNQIPNSTTQHHTIPSRSILPKPSIHQFDPQSLSNVPMNQPQPLNNYQYNSQIPYDFPVHKSPPMDEFNPQVLSPVPLQMQLPMNQFNLQNITQLTPSMPSGLVNQQPYHMSPRMTMFPKFPSSGPFHATHSTPQNHIVHHVPPIHQWNRQNPSNVVQYNPQPLISPEFSSDPWLSNRQHLVNQPSFNSEAPINIDQTDTKGKLWSKEEHKKFLMGLRIYGKGKWKEISQYVETRTSIQIGSHAQKYFEHQTREGNKKRKRKSINDITDPDAFP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0577 433 CDD SANT 364 407 IPR001005 -
Lele35g0577 433 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 363 410 IPR006447 GO:0003677
Lele35g0577 433 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 306 428 IPR043363 -
Lele35g0577 433 SUPERFAMILY Homeodomain-like 360 412 IPR009057 -
Lele35g0577 433 Pfam Myb-like DNA-binding domain 364 407 IPR001005 -
Lele35g0577 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 358 411 IPR017930 -
Lele35g0577 433 MobiDBLite consensus disorder prediction 408 433 - -
Lele35g0577 433 MobiDBLite consensus disorder prediction 408 426 - -
Lele35g0577 433 Gene3D - 364 412 - -
Lele35g0577 433 ProSiteProfiles Myb-like domain profile. 356 407 IPR001005 -
Lele35g0577 433 SMART sant 360 409 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0577 Lele-ChrLele35 3834374 3835787 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele35g0577 Myb_DNA-binding 2.7e-11 CL0123