Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0566 ATGGAAAACGAGCCTCTTCTCGCATATTACAGTCCCAGAAAGCGTCATACACCTTTGCATCTGGCGCCTCTGACAGAGAATGACGAGGTGGTCCTTCCTCTAAGCCCATCGGAGATCAAGGACCGTCTTATCTTTGGCCCCTCGACTCCTAGAGATTCTGCAGCTTTAGTTGAAGCACTCACGCTCTCGCTTAATTCCCCAGGACAACCTTCTTCTTCACACGACCTTTTAGCTACTGTCGTCGAATCACAATCCAAATTACCCCAAAAACAATGTTCCAACCCTTATGTTCGTCGCTGTCAAACGGCACCGGCTATGTCTGTGATCAAAGAATTCAACCAACGCTCTGAGCCTAAACCTCAATGTAGTTCAAATTCAATTGTTTGCCAAGCGGCTATTCTTCTTGTTATTTATTTATCATTGGGGGTGGTTATATATTTTCTCAATCGTCATAGTTTTACTGGAATCGAGACTAATCCTGTCGTGGATGCGCTCTATTATTGTGTAGTAACAATGTGCACAATAGGATACGGTGACATTACTCCCGCTAGTACAGCAACAAAGCTTTTTTCTATTCTGTTTGTGTTGGTGGGATTTGGGTTCATCGACATATTGCTCGGTGGGATGGTGAGTCATGTTCTTGATTTACAAGAGAGTCACTTGTTGAAGACAATGAAGAGATCATATGTAATTGATGCGAAGAAAGGTAGGATGAGGATTAGGATGAAGGTGGCCTTGGCATTGTTGGTTGTGGTTCTTTGTATTGGGGTTGGTGTTTGTGTGATGCATTATGTGGAAAAACTTACATGGATGGATTCTTTCTATCTTTCTGTGATGTCAGTTACAACAGTTGGCTATGGTGACCAGGCTTTTAAGTCACTTTCTGGTCGCATCTTTGCTGCAATTTGGTTGCTTTTATCGACTCTTGCAGTTGCTAGGGCTTTTCTTTATTTAACTGAGGCAAGAGTGGATAAGAGGAATAGAAGAATGGCAAAGTGGATTCTTGGTCATGATATGAGTGTTTCTGAGTTTTTTGCTGCAGACTTAGACCATAATGGTTGTGTGAGTAAATCAGAATTTGTTATATACAAGCTCAAGGAGATGGGAAAACTGTCTGAGAAAGACATCATGCAGGTTGGCGAGAAGTTTGACCAGCTAGATACCGGTGAACGTGGCTATATAAAACTTGCTAACCTCAGGGAGGCTAATGATTGA 1215 0.4239 MENEPLLAYYSPRKRHTPLHLAPLTENDEVVLPLSPSEIKDRLIFGPSTPRDSAALVEALTLSLNSPGQPSSSHDLLATVVESQSKLPQKQCSNPYVRRCQTAPAMSVIKEFNQRSEPKPQCSSNSIVCQAAILLVIYLSLGVVIYFLNRHSFTGIETNPVVDALYYCVVTMCTIGYGDITPASTATKLFSILFVLVGFGFIDILLGGMVSHVLDLQESHLLKTMKRSYVIDAKKGRMRIRMKVALALLVVVLCIGVGVCVMHYVEKLTWMDSFYLSVMSVTTVGYGDQAFKSLSGRIFAAIWLLLSTLAVARAFLYLTEARVDKRNRRMAKWILGHDMSVSEFFAADLDHNGCVSKSEFVIYKLKEMGKLSEKDIMQVGEKFDQLDTGERGYIKLANLREAND 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0566 404 SUPERFAMILY Voltage-gated potassium channels 124 213 - -
Lele35g0566 404 ProSitePatterns EF-hand calcium-binding domain. 348 360 IPR018247 -
Lele35g0566 404 PRINTS Two pore domain K+ channel signature 282 291 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele35g0566 404 PRINTS Two pore domain K+ channel signature 170 198 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele35g0566 404 SUPERFAMILY Voltage-gated potassium channels 230 340 - -
Lele35g0566 404 Gene3D - 225 335 - -
Lele35g0566 404 FunFam Two-pore potassium channel 3 227 341 - -
Lele35g0566 404 Gene3D - 125 224 - -
Lele35g0566 404 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 160 378 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele35g0566 404 Pfam Ion channel 249 319 IPR013099 -
Lele35g0566 404 Pfam Ion channel 133 207 IPR013099 -
Lele35g0566 404 SUPERFAMILY EF-hand 341 401 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0566 Lele-ChrLele35 3714715 3717030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0566 3 403 Ion Channels AT4G18160 57.243 2.83e-162 461