Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0564 ATGTCTGATGAGCATAAGGAGCTATACGAGCAAGGCCGATCCACCATGTACTCATCATCGTCTTATGATTCACAAGCTTTCGATCCTTCTTCTTACATGAGTTTATCTGAGTGTCTGCAAATAGGAGCCATGGACTACAATTCACTCTCATCTTCTTTTGGTCTCTCCGAGGTATTGATTTCATCTGCTGATCACCAACAAGAAGCCAACACTGATCAAAAGCCATCATCAGAAGATGCAGATTGCGGTGGAGAGGGAGCCGGCGGTGAAACTCCACTACTCACCCAGAACTCATCTCTCTCTTCCTTTTCTTCTGAACCTGGCGCTGAAGAAGAAGATTCAGGCAAGAACACTGTCGACGATCATCATAACCAAGCGAAACGAGAAGAGGAAGCAGAAAGATCTAAAAAAGGGAAGAAAGGAAAGAAGAAAGGAAATAAGAAGGAAGAGAAGGAGCCAAGGTTTGCTTTCATGACAAAGAGTGAGGTTGATCAGCTTGAAGATGGTTACCGATGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGTTACTACAGGTGCACGACACAGAAGTGCACAGTGAAGAAAAGAGTGGAGAGGTCGTTTGAGGATCCAACCACTGTGATAACAACGTACGAAGGTCAGCACAATCATCCTGTCCCCACTTCTCTCAGAGGAAATTATAATCCTGCTGCTATGTTCACACCTTCTTCTTCTTCGTCTTCTTCCATTCTCTCTTCTCTCATGATGCCAACACCTCAAGACTTGCTTCTCCATCATGGAACCTCCAATATGAATAACACTTCTCTTTATTATTCTCATCACAACTATGCTAATCCTAGTTCTGCTCATCAGTATCGTCATCATCTTCATTATCATCAGCTTCCAGTTCCTGATCAGCATGACAATGGCCTCCTCCAAGACTTAATCCCTTCTATGTTCTTCAAACAAGAACCTCGAGAATGA 981 0.4353 MSDEHKELYEQGRSTMYSSSSYDSQAFDPSSYMSLSECLQIGAMDYNSLSSSFGLSEVLISSADHQQEANTDQKPSSEDADCGGEGAGGETPLLTQNSSLSSFSSEPGAEEEDSGKNTVDDHHNQAKREEEAERSKKGKKGKKKGNKKEEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPTSLRGNYNPAAMFTPSSSSSSSILSSLMMPTPQDLLLHHGTSNMNNTSLYYSHHNYANPSSAHQYRHHLHYHQLPVPDQHDNGLLQDLIPSMFFKQEPRE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0564 326 MobiDBLite consensus disorder prediction 64 154 - -
Lele35g0564 326 MobiDBLite consensus disorder prediction 1 29 - -
Lele35g0564 326 SUPERFAMILY WRKY DNA-binding domain 158 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g0564 326 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g0564 326 Gene3D WRKY domain 150 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g0564 326 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g0564 326 MobiDBLite consensus disorder prediction 91 108 - -
Lele35g0564 326 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 266 IPR044810 GO:0003700
Lele35g0564 326 MobiDBLite consensus disorder prediction 109 137 - -
Lele35g0564 326 FunFam WRKY transcription factor 57 152 226 - -
Lele35g0564 326 MobiDBLite consensus disorder prediction 12 29 - -
Lele35g0564 326 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0564 Lele-ChrLele35 3701489 3703179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0564 26 324 WRKY Transcription Factor Family AT4G18170 47.950 1.64e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele35g0564 WRKY 9.9e-26 CL0274