Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0548 ATGGATGCTACCATTGCTTTAACGCTCATAGAAGTTGTTTTGATTTTGCTGGCTATAGCAATTTCTAAATTCACATTAATCTCCCAACTTCATTATAGTTGTAAAGATACTGTTGTGGATTCGATTCCCACGGTTTCTTCTCCTTCTTCTCATATCATTGTTGCTCCTCCTGAAACCAATTTTGGAGATGGATTTGCTAAGCTTAAGCAGAGATTTAAGCACAACCAAGAAAGAGTGCAGGAATGGAAAAATGCTTTGATCGAATCAACAAAACTATCTGGGTGGGATTCAAAAAGTATCAGGTATGAAGCGGAACTAATTAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATAACAAGCCATCCTTTGATTCGGAAGGATTAGTTGGGATTGGTCATCAGATTCAGAAACTTGAAGAGTTGCTCAAGGAAGCTCGCAATGTGGGGATATGGGGTATGGGTGGTATAGGTAAGACCACTCTTGCTAGAGCTGTGTTTCACAAGTTGAAAGCACAGTTTGAAGCTTTCTCCTTTGCTGAAAATGTAAGAGAACGACTAGCAAGAATCGGATTAGATGAATTACAGGAAAAATGCCTTAGAGAATTATTAAAAGATGAGGATATTAACACTTACAATTTAAGATCCAATTTTGTGAAGAATAGGCTTCACCGTAAAAAGATTCTTCTGGTACTTGATGATGTGGACAATTCTATAGCAATTGAAGATTTAATCAAAGCATGCGGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACTTCAAGAGACACTCAAGTGCTTAAGAATACTTCTGCAACCACAACATATCGTTTTCAGAAATTGGATCTCTATCATGCTCTTCATCTCTTTAGTTTGAAAGGATTCAAGCAAAATGAGCCAATTAAAAGCTATTTGGAGTTATCAAAGCTGGCAGTGCATTATTGTCAAGGAAATCCACTAGCCCTAATAGTGTTGGGTTGCTTTCTTCATGGCAGAGGAAAACAAGAGTGGGAAAGTGCTTTGGAAAAACTAAATCAAGCTATTCACAGGGACATTTTTAATGTGCTGAAATTGAGTTTTGATGGACTTGATGGCACACAGAAGAATGTATTTCTTGACATAGCATTTTTCTTGAACGGAGCATGGAGGATTTCTCTTGATTGTACAAGAAGCTTATATGGTTCTTCTGCACATATTGAGATAAGTGTACTTAAAGAGAGATCCCTCATTTCAGTGCGTGAAATTGGCTGGGATTGA 1257 0.3715 MDATIALTLIEVVLILLAIAISKFTLISQLHYSCKDTVVDSIPTVSSPSSHIIVAPPETNFGDGFAKLKQRFKHNQERVQEWKNALIESTKLSGWDSKSIRYEAELIKKIVKDILSKLNNKPSFDSEGLVGIGHQIQKLEELLKEARNVGIWGMGGIGKTTLARAVFHKLKAQFEAFSFAENVRERLARIGLDELQEKCLRELLKDEDINTYNLRSNFVKNRLHRKKILLVLDDVDNSIAIEDLIKACGWFGEGSRIIITSRDTQVLKNTSATTTYRFQKLDLYHALHLFSLKGFKQNEPIKSYLELSKLAVHYCQGNPLALIVLGCFLHGRGKQEWESALEKLNQAIHRDIFNVLKLSFDGLDGTQKNVFLDIAFFLNGAWRISLDCTRSLYGSSAHIEISVLKERSLISVREIGWD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0548 418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 412 IPR044974 GO:0006952
Lele35g0548 418 Pfam TIR domain 60 130 IPR000157 GO:0007165
Lele35g0548 418 PRINTS Disease resistance protein signature 148 163 - -
Lele35g0548 418 PRINTS Disease resistance protein signature 222 236 - -
Lele35g0548 418 PRINTS Disease resistance protein signature 315 329 - -
Lele35g0548 418 Gene3D - 126 276 IPR027417 -
Lele35g0548 418 Gene3D - 47 124 IPR035897 -
Lele35g0548 418 Pfam NB-ARC domain 140 347 IPR002182 GO:0043531
Lele35g0548 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 374 IPR027417 -
Lele35g0548 418 Gene3D - 281 364 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0548 Lele-ChrLele35 3576597 3579140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0548 6 414 WRKY Transcription Factor Family AT4G12020 29.594 2.08e-40 152