Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0547 ATGCTCAGAAAAGTTTTATTGATCCTATTGGGATCAGTATCAATTTCCGAAGCTATCAGATTCATCTCTCATTCGCTTAATCGTAACCAACCTGTTGCTGTTGATGATAGTTCTCAAGATGATCTTATTTTAACTCAAACGGTATCTCCTCCTCCTACCAAACCTGAATCCAAACTTATTGAAGATGTTGTCAAAGACATTTTGAGCAAGTTGAAGTATAAGTCATCATCTCATCTTGAAGAACTCGTTGGCATTGCTCCTCATATCGCAAGTATTGAAAAACTGCTAACTGAGGCTCGCATTGTGGGGATATGGGGTATGGGTGGTGCGGGTAAGACCACTCTTTCTAAAGCTTTATTTCATGAGTTGAAAACTCAATTTGATGCTTTCTCCTTTCTTGGCGATGTCAAAGAGAAATTGAAAAGAATCAGTTTGGAGGAGTTACAGAAGAATTGCCTCAAAGAATTATTAAAAGATGAGGACATTGACATCAATGACATAAAATCCACTTTTGTTAAAAATAGGCTTCAAGGGAAAAAAATTCTTTTTATACTTGATGATGTGGACAACTCAATAATAGCTGAAGATTTAACCAAAGTGTGTGATTGGTTTGGGGAAGGAAGTAGAATTATAATCACATCAAGAGACATGCAAGTGCTTAAGAATGCTTCTGCATTTTCAACATATCATGTTCCGAGATTGGATTTTTATGATGCCTTTCATCTCTTTAGTTTGGAAGCATTCAAGCAAAATGAGCCATATGAAGGTTACATGGAGTTATCAAAATCAGTAGTTAAATATTGTCAAGGAAACCCATTAGCCCTAAAAGTGTTGGGCTGCTCTCTCTATGGCAGAGGAAAACAAGAGTGGGAAAGTTCTTTGGAAAAACTAAACCAAGCTCCACCCAAGGACATTGTTGATGTTCTGAAATTGAGCTTTGATGGACTTGATGAGAATCAAAAGAATACGTTTCTTGACATAGCATTTTTCATCAAGGAAAGAGTTGAAGTTTCTTTGGACCTAATAAGCGGATTATATGGCTCTTCTGTATATATTGACATAAGTGTTCTTAAAGATAGATCCCTCACTTCATTTGATCATAATGGCTATATTGTGATGCATGATCTTTGCATCAGATTCGTAGGGATACTCTTCATTCGATGTCCTGTAACTGGTCTTGTCGTTACTCTTTAG 1194 0.366 MLRKVLLILLGSVSISEAIRFISHSLNRNQPVAVDDSSQDDLILTQTVSPPPTKPESKLIEDVVKDILSKLKYKSSSHLEELVGIAPHIASIEKLLTEARIVGIWGMGGAGKTTLSKALFHELKTQFDAFSFLGDVKEKLKRISLEELQKNCLKELLKDEDIDINDIKSTFVKNRLQGKKILFILDDVDNSIIAEDLTKVCDWFGEGSRIIITSRDMQVLKNASAFSTYHVPRLDFYDAFHLFSLEAFKQNEPYEGYMELSKSVVKYCQGNPLALKVLGCSLYGRGKQEWESSLEKLNQAPPKDIVDVLKLSFDGLDENQKNTFLDIAFFIKERVEVSLDLISGLYGSSVYIDISVLKDRSLTSFDHNGYIVMHDLCIRFVGILFIRCPVTGLVVTL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0547 397 SUPERFAMILY "Winged helix" DNA-binding domain 304 372 IPR036390 -
Lele35g0547 397 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 377 IPR044974 GO:0006952
Lele35g0547 397 Pfam NB-ARC domain 93 301 IPR002182 GO:0043531
Lele35g0547 397 FunFam Disease resistance protein (TIR-NBS-LRR class) 235 317 - -
Lele35g0547 397 PRINTS Disease resistance protein signature 268 282 - -
Lele35g0547 397 PRINTS Disease resistance protein signature 101 116 - -
Lele35g0547 397 PRINTS Disease resistance protein signature 175 189 - -
Lele35g0547 397 Gene3D - 74 228 IPR027417 -
Lele35g0547 397 Gene3D - 234 317 IPR042197 -
Lele35g0547 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0547 Lele-ChrLele35 3567773 3569929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0547 81 382 WRKY Transcription Factor Family AT5G45050 36.656 1.31e-46 169