LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele35g0544	ATGCAATTTACAGGGCAACACCAACGCGGAGACGCTTGCGTTCAAGAAATAGAAGAGAAAGAAGACATTTATAAGATGCGAGAGCCAAGTGTTCTGCTATCTCCGGGAGCTATTTCTTCTGCTTCCTCCAGACGCTGAGAAAGCAACTCTGCAAATTCTGAAGCCGCCATTTCTGAGACCTTAGCTTGTGAGCTATTTCTTTATTCGCTTCCCTCCCTCCACATCGATCCAGATTCATATATACTGTTTTGCTTGCTCTTTAATTTCTATCGCATTAGTTTGAGGTTGCTGAAGGTTGAAGCTAGAAATTGCTGTGACATGGATGGAACCCTTGTTCTAATTCTCATAGAAGCTCTATTGATCTTATTGGCTTTATTAATTTCCAAAGCTATCAGATTCATCTCTCCTTCGCTTTATGGTAACCAACATGTTGCTGTTGATGACAGTTTTAAAGATGATGTGATTTTAACTCAAACGGTTTCTCCTCCTTCTTCTCATATTGTGGTTTCTCCTCCTGCTACCAAACCTGAATCCAAACTTGTTGAAGATATTGTCAAAGACATTTTGAGCCAGTTGAAGTTGAAGTATAAGTCATCATCTCATCTTGAAGGACTCGTTGGCATTGCTCCTCATATTTCAAATATTGAAAAACTGCTAACCGAGGCTCGCATTGTGGGAATATGGGGTATGGGTGGTGCTGGTAAGACCACACTTGCTAAAGCTTTATTTCATGAGTTGAAACCTCAATTTGATGCTTTCTCCTTTCTTGACAATGTCAAAGAGCAATTGAAAAGAATTAGTTTGGATGAGTTACAGAAGAATTGCCTCAAAGAGTTATTAAAAGATGAGGACATTGACATCAATGACATAAAATCCACGTTTGTGAAAAGTAGGCTTCAAGGGAAAAAAATTCTTGTTATACTTGATGACGTCGACAATTCAATAATTGCTGAAGATTTAACCAAAGTGTGTGATTGGTTTGGGGAAGGAAGTAGAATTATCATCACATCAAGAAACGAGCAAGGACTGGTCAACGACGAAGGAGGAACTGTCGTATGCTCTAGGCTCATGTCCTTTACTTCTAGTGCTTGA	1092	0.3947	MQFTGQHQRGDACVQEIEEKEDIYKMREPSVLLSPGAISSASSRRXESNSANSEAAISETLACELFLYSLPSLHIDPDSYILFCLLFNFYRISLRLLKVEARNCCDMDGTLVLILIEALLILLALLISKAIRFISPSLYGNQHVAVDDSFKDDVILTQTVSPPSSHIVVSPPATKPESKLVEDIVKDILSQLKLKYKSSSHLEGLVGIAPHISNIEKLLTEARIVGIWGMGGAGKTTLAKALFHELKPQFDAFSFLDNVKEQLKRISLDELQKNCLKELLKDEDIDINDIKSTFVKSRLQGKKILVILDDVDNSIIAEDLTKVCDWFGEGSRIIITSRNEQGLVNDEGGTVVCSRLMSFTSSA	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele35g0544	363	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	160	343	IPR044974	GO:0006952
	Lele35g0544	363	Gene3D	-	189	346	IPR027417	-
	Lele35g0544	363	PRINTS	Disease resistance protein signature	224	239	-	-
	Lele35g0544	363	PRINTS	Disease resistance protein signature	298	312	-	-
	Lele35g0544	363	Pfam	NB-ARC domain	217	341	IPR002182	GO:0043531
	Lele35g0544	363	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	192	341	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele35g0544	Lele-ChrLele35	3513369	3518881	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele35g0544	175	344	WRKY Transcription Factor Family	AT4G12020	36.932	3.08e-25	105