Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0517 ATGGCCGACGAATCCAATACCACTTGCTGGTCTTTCCTGTTTTATGATGCCAAGTCTAATGAGAAGAAACTATTGGAGAACGGCGAGAGGGTAGATGAAAATAATCATCCCAAAAGGACTCCGGAGACTACTATATTTGAACAGTTTCAAAGCCAGATTAACTGGAATGTTCTGTGTCATTTGCATAATGAAACCACAGGTTATCATCTGCAAAAGTCTTTGCTTCCACCTTTTGAATCAGCTGATATGCGTGCTTTAGGAGAGAGTTTATGTAGGGATATTATTCGTGGGAGCCCGGATGTTAAGTGGGAAAACATCAAGGGTTTAGATAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTTACGGGTTTATTATCACCTTGGAAAGGGATTCTTTTGTTTGGCCCTCCTGGGACTGGAAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAAGACTACGTTTTTCAATATTTCAGCATCATCTGTTGTTAGCAAATGGAGAGGCATGCTTTAA 546 0.4103 MADESNTTCWSFLFYDAKSNEKKLLENGERVDENNHPKRTPETTIFEQFQSQINWNVLCHLHNETTGYHLQKSLLPPFESADMRALGESLCRDIIRGSPDVKWENIKGLDNAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGML 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0517 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 181 IPR027417 -
Lele35g0517 181 PANTHER AAA DOMAIN-CONTAINING 38 179 - -
Lele35g0517 181 CDD AAA 107 179 - -
Lele35g0517 181 Pfam ATPase family associated with various cellular activities (AAA) 140 179 IPR003959 GO:0005524|GO:0016887
Lele35g0517 181 Gene3D - 99 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0517 Lele-ChrLele35 3307147 3309571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0517 52 179 Calmodulin-binding Proteins AT3G56690 35.659 1.77e-16 74.7