Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0502 ATGGACTCAAAAACTAGTGCTAGAGCTGCCCAGAAACAGCATCATAAGAACGCTGGGATTCAAACAATAGATGCAAAAGACATCAAATCTTCAAAGACAGGCAAATCTGAACTGGCTGCGCCAGAAGGTTTATCAAAATATGTTGGAGACACTTCTGAAAACAAGAAGCTAGGAATTTCAAACTCCAAGGAGTCAGCTGATTCCTTGATTAGTAAATTTGGTTCTGCTGTTTCCTTATCTGTTAATGAACAGCTATCTGGAGGAATTGACCATGTTGTTAATGGAAATAGAGGTTTACAGGAAGGCTCTATTGATCAAGAAAAGAAAACATCAGAATATGGAAGTGTGAAGAGTAGTTCTGTTTCTGCTAAAGTTAGTGATGGGGCCGGCAGCCTGGCGAAGACCAGTGGAAGTGCCAAGATCAGTGATCGAGTTGATCTTGTTGAGAGTGGAAAGAGCAGTATTTGCAGAGGAAGCACAAGCAGTGATGTGAGTGATGAGAGCACTTGCAGCAGCTTTAGTAGCACTGTCAACAAGCCTCACAAGGCAAATGACTTGAGATGGGAAGCTATTCAAGCTGTCCGATCTAAAGATGGGGCTTTGGGCTTAGGTCACTTTAGACTATTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTATCAGAGTTGAGTGGAACTAAATGTTATTTCGCGATGAAGGTAATGGATAAAGGGTCTTTAGCAAGTCGTAAGAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCAACATTGTATACCCATTTTGAGACAGAGAAGTTCTCATGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCACAGGCAGAGGCAACCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTACGTGGCAGAGGTGCTGCTGGCGTTGGAGTACCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCGGAAAATGTCCTCGTTAGGGATGATGGACACATTATGCTTTCAGACTTTGACCTTTCCCTCCGCTGCACTGTTAGTCCGACTCTTGTTAAAAGTTCAGTCATGGAATCTGACCCTTTAAGAAAGAATCCTGTATATTGTGTGCAGCCTGCTTGTATTGAGCCGCCTTCCTGCATTCAGCCATCCTGTGTTGCTCCTACAACATGCTTTTCGCCTCGGCTCTTTTCTAGCAAATCAAAGAAGGATCGGAAACCCAAAACTGAAATAGGAAACCAAGTGACTCCATTGCCTGAGCTCATTGCTGAGCCTACCGATGCACGATCTATGTCATTTGTTGGAACCCATGAATACTTGGCACCGGAAATCATCAAGGGAGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATACGAGCTTTTGTTTGGAAAGACTCCTTTCAAGGGATCCGGGAACCGAGCTACATTATTTAATGTCGTAGGCCAGCCTCTCCGATTTCCCGAAGCACCTGTTGTAAGTTTTGCAGCCAGGGATCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGCACAGGTTGGCTTATAAACGAGGCGCCACCGAGATAAAGCAACATCCCTTTTTTGAAGGCGTGAATTGGGCACTCATTCGCTGCGCTACCCCACCAGAGATCCCAAAGCCTGTAGAGTACGAGAAGATACCTTCCCCGGCCTCATCAGCCGCTGAAAAGGCCAGCCACCACCATCATATGTCAATTCCCGATCAGAAAGGTTCTGGTAATTATCTTGAGTTTGATTTCTTCTAG 1812 0.4531 MDSKTSARAAQKQHHKNAGIQTIDAKDIKSSKTGKSELAAPEGLSKYVGDTSENKKLGISNSKESADSLISKFGSAVSLSVNEQLSGGIDHVVNGNRGLQEGSIDQEKKTSEYGSVKSSSVSAKVSDGAGSLAKTSGSAKISDRVDLVESGKSSICRGSTSSDVSDESTCSSFSSTVNKPHKANDLRWEAIQAVRSKDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTHRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLVKSSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAAEKASHHHHMSIPDQKGSGNYLEFDFF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0502 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Lele35g0502 603 Gene3D Phosphorylase Kinase; domain 1 205 285 - -
Lele35g0502 603 FunFam serine/threonine-protein kinase D6PK-like 290 357 - -
Lele35g0502 603 FunFam Serine/threonine-protein kinase AGC1-7 437 562 - -
Lele35g0502 603 Gene3D Transferase(Phosphotransferase) domain 1 438 562 - -
Lele35g0502 603 MobiDBLite consensus disorder prediction 100 120 - -
Lele35g0502 603 Pfam Protein kinase domain 441 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0502 603 Pfam Protein kinase domain 207 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0502 603 SMART serkin_6 206 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0502 603 MobiDBLite consensus disorder prediction 1 59 - -
Lele35g0502 603 PANTHER FLIPPASE KINASE 1-RELATED 32 568 - -
Lele35g0502 603 ProSiteProfiles Protein kinase domain profile. 206 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0502 603 MobiDBLite consensus disorder prediction 571 592 - -
Lele35g0502 603 Gene3D Transferase(Phosphotransferase) domain 1 286 355 - -
Lele35g0502 603 SUPERFAMILY Protein kinase-like (PK-like) 184 577 IPR011009 -
Lele35g0502 603 FunFam Serine/threonine-protein kinase D6PK-like 204 289 - -
Lele35g0502 603 CDD STKc_phototropin_like 205 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0502 Lele-ChrLele35 3175391 3178280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0502 34 603 AGC Kinase Gene Family AT5G47750 77.816 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele35g0502 Pkinase 1.2e-36 CL0016