Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0495 ATGGACGACCTCTTTACCGTCGACGATTTCCCTTACCACGTGGCCCCATTTCCCGACACCTCTGACCTCCTTTACACCCACCCCACTCCGGCTTTTCACCCTCCTGACGATGCCGACCCCCGCCGGCTTCTCAACCCCCATCCACAGAAGCTCCGGCCCATTCGGAGCCTCGACCGGTCTTCTTCGCCGCCATCGCTGGTCGCCGAGATTCCTGAGAATGGAGGGCTCGCAGGAGCGTCTAACGATGTCGGTTACCTTTGTCATCAGTCAAGTCAGAATCTTGAGTTTCTTGGTCAGCGAGTTGAGTCTTGCGAGGAGCTGAGGAAGGAAGCTGCCGATGATGTTGCCGGAAATGATTGGCTTCAGGCGGAGACTCCTGCGGTGCTCCGGAAGTGTCATACTTGTGACCCGAATGCCGATGGGTTTAAGTTGACGCAGGAATCTGGTTCATCCCGGGACAATGATGACGATTCATCTGAAAGTGTGGAAGAACCCGGGAGTGGAAAGAAAAGAGAGAAGACGATCACAAAGTTTGAAGCTTTTCTAGAAAATTTGGCGACGAAGGTGATGGAAAAGCAAGAGCAGATGCATAACCAACTGCTGGATATGATAGAAATGAGAGAAAGGGAAAGAGCTATGAGAGAAGAATCTTGGAAGCAAAAGCAGATGGAAAGAATTAAAAAGGATGAGGAGGCGAGAGGTCGAGAAAAATCGAACAACCTAGCTCTGATATCATTAATTCAGAATCTACTGGGCCATGAAATTCAAATTCCCCAGCTGGCAGCAACCAGCTCAAGGGAGGAGGAGGACGAAGAAGGCGAAGTGAACATCCAAAGAGATTTCAACAGTGATCAGAGTAACAATAATAGATGGCCAGAAGCTGAAGTACAAGCGCTCATAACTCTAAGAACTTCTTCAGAACACGAATTTCGAGGGGCGGGATCCAAATTATCTCCATGGGAGGAGATATCTAAGGCAATGCATAATATGGGTTACAGTCGTTCTGCAAAGAAATGCAAGGAGAAATGGGAAAACGTCAATAAGTATTATAAGAAAACAATGGAGAGTAGGAAGAAGCGACGTCTAAAGAGTAAAGCTTGCCCATACTTTGATGAGTTGGACATTCTGTACCGAAATCGGCTCCCGAATATAGGGAATGCCGCCTTGAGCGACACCTCAATGTCATCAAAGATCAAAAAGGAATAA 1206 0.4784 MDDLFTVDDFPYHVAPFPDTSDLLYTHPTPAFHPPDDADPRRLLNPHPQKLRPIRSLDRSSSPPSLVAEIPENGGLAGASNDVGYLCHQSSQNLEFLGQRVESCEELRKEAADDVAGNDWLQAETPAVLRKCHTCDPNADGFKLTQESGSSRDNDDDSSESVEEPGSGKKREKTITKFEAFLENLATKVMEKQEQMHNQLLDMIEMRERERAMREESWKQKQMERIKKDEEARGREKSNNLALISLIQNLLGHEIQIPQLAATSSREEEDEEGEVNIQRDFNSDQSNNNRWPEAEVQALITLRTSSEHEFRGAGSKLSPWEEISKAMHNMGYSRSAKKCKEKWENVNKYYKKTMESRKKRRLKSKACPYFDELDILYRNRLPNIGNAALSDTSMSSKIKKE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0495 401 CDD GT1 289 353 - -
Lele35g0495 401 MobiDBLite consensus disorder prediction 149 173 - -
Lele35g0495 401 SMART sant 287 349 IPR001005 -
Lele35g0495 401 MobiDBLite consensus disorder prediction 24 66 - -
Lele35g0495 401 Coils Coil 190 210 - -
Lele35g0495 401 ProSiteProfiles Myb-like domain profile. 283 347 IPR001005 -
Lele35g0495 401 PANTHER FI21293P1 135 388 - -
Lele35g0495 401 Pfam Myb/SANT-like DNA-binding domain 289 374 IPR044822 -
Lele35g0495 401 Gene3D - 291 352 - -
Lele35g0495 401 SUPERFAMILY Homeodomain-like 288 365 IPR009057 -
Lele35g0495 401 MobiDBLite consensus disorder prediction 142 173 - -
Lele35g0495 401 FunFam Trihelix transcription factor GT-2 291 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0495 Lele-ChrLele35 3115491 3117613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0495 167 379 Trihelix Transcription Factor Family AT5G47660 40.708 3.10e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele35g0495 Myb_DNA-bind_4 7.8e-21 CL0123