Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0433 ATGGCGGGTTCCTGCTTCAACGCGCTTCGCCTGCGAAGGTCGAAGAGTAAACCTATCGGGGAGGCGTCTTCTTCGACGAGGACCAGGCTGAATTCTGACATGGAGAATATGGAGAGGAGGAGATTTGATAGTTTGGAATCGTGGTCGATGATATTGGACTCTGAGAATGTGGAAACATGGGAGGCGTCTAAGGAGGATCAGCAAGAGGAATGGAACGCTGATCTTTCGCAGCTTTTCATAGGAAACAAGTTCGCTTCTGGTGCTTATAGTCGGATTTACCGAGGGATTTACAAGCAGAGAGCCGTGGCTGTGAAAATGGTGAGGGTTCCATTACATGAAGAGGACAAAAGAGACGTGCTAGAGAAGCAATTCAAATCTGAAGTTGCTTTACTTTCACGTCTCTTTCATCCTAGCATAGTGCAGTGCCATAGTGACGCTGATATCAAGTTGGATCTAGTACGTATGCTAAAATCTACCTCTGTCTGTGAGTTTTGCATCAACCACAACTCTGTATCCCACATTCTTTTTAGATATGAAGCCTCATATTTGTACTTTATTGCAGCTTGTAAAAAACCACCTGTGTACTGTATCATAACAGAATACATGTCGCAAGGAAACCTGAGGATGTATCTGAACAAGAAAGAGCCTTACTCTTTATCTACAGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGCATGGAGTACCTTCATTCGCAAGGTGTGATCCACAGAGATTTAAAATCAAATAACTTGCTTCTCAATGATGAGATGAGGGTTAAGGTGGCTGATTTTGGCACATCATGTCTCGAAACACGATGTCGAGAGACCAAAGGAAATATGGGAACGTATCGTTGGATGGCGCCAGAGATGATTAAGGGAAAACCTTACACCCGGAAAGTTGATGTTTATAGTTTTGGAATCGTGCTTTGGGAGCTCACAACCTCTCTTCTTCCCTTCCAAGGAATGACCCCTGTGCAAGCTGCCTTTGCTGTGGCAGATAAGAATGAGAGGCCTCCATTACCAGCAAGTTGTCAACCAGCATTAGCACATCTGATAAAGAGATGCTGGTCAGCAAACCCATCAAAGAGACCAGATTTCAGCGACATAGTGTCTGCTTTGGAGAAGTACGATGAGTGTGTGAAGGAGGGCCTACCTCTTACTCATCATTCGGGTCTTGTCTCTCGAAATGCCATTATTGAACGCTTAAAAGGTTGTGCTTCCATCATTTCCTCCTCTATACATGTACATACCTGA 1260 0.4421 MAGSCFNALRLRRSKSKPIGEASSSTRTRLNSDMENMERRRFDSLESWSMILDSENVETWEASKEDQQEEWNADLSQLFIGNKFASGAYSRIYRGIYKQRAVAVKMVRVPLHEEDKRDVLEKQFKSEVALLSRLFHPSIVQCHSDADIKLDLVRMLKSTSVCEFCINHNSVSHILFRYEASYLYFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKGKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVADKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSALEKYDECVKEGLPLTHHSGLVSRNAIIERLKGCASIISSSIHVHT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0433 419 SMART serkin_6 78 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0433 419 FunFam serine/threonine-protein kinase HT1 204 396 - -
Lele35g0433 419 Pfam Protein tyrosine and serine/threonine kinase 183 375 IPR001245 GO:0004672|GO:0006468
Lele35g0433 419 CDD STKc_MAP3K-like 85 375 - -
Lele35g0433 419 ProSiteProfiles Protein kinase domain profile. 78 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0433 419 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 378 - -
Lele35g0433 419 Gene3D Phosphorylase Kinase; domain 1 67 145 - -
Lele35g0433 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Lele35g0433 419 PRINTS Tyrosine kinase catalytic domain signature 199 212 IPR001245 GO:0004672|GO:0006468
Lele35g0433 419 PRINTS Tyrosine kinase catalytic domain signature 237 255 IPR001245 GO:0004672|GO:0006468
Lele35g0433 419 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Lele35g0433 419 PRINTS Tyrosine kinase catalytic domain signature 283 293 IPR001245 GO:0004672|GO:0006468
Lele35g0433 419 PRINTS Tyrosine kinase catalytic domain signature 346 368 IPR001245 GO:0004672|GO:0006468
Lele35g0433 419 SUPERFAMILY Protein kinase-like (PK-like) 58 375 IPR011009 -
Lele35g0433 419 Gene3D Transferase(Phosphotransferase) domain 1 180 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0433 Lele-ChrLele35 2708475 2712468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0433 1 409 MAP Kinase Kinase Kinase AT1G62400 72.792 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele35g0433 PK_Tyr_Ser-Thr 1.4e-54 CL0016