Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0429 ATGACGTTGGATATCTCCAACGGCGAGTTTTTGCGCATGGCGAGCGAGGCTCCGGAATCCTTCACCGTCGATATGTTGCAGCCGCGGACATCTGTCAAGAACGGAGACGGTAACGGGACTGGTGGGGAGGAGATGTTGATGCCTCCCCTGAACTTCGGGATGGTCGATTATGGCATTTTTAGGTCTGGCTTTCCTGATTCCGCCAGCTTCGGGTTCTTGAGATCCCTTAGCCTCCGTTCCATTATATGTTTGTTCCCTGATGAGTATCCAGAAGCCAATTTAGAGTTCCTGAAGGCTAATGGAATAAGGCTTTATCAATTTGGAATCGATGGCTCTAAGGATCCTTTGACAAAAGTCCCGGAAGAATCAATTCGTGAGGCATTGGAAGTTATCCTAGATGTTGGGAACCGGCCATTGCTCATTCATTGCAAGAGAGGGAAGCATCGCACTGGTTGTCTTGTGGGATGCTTAAGAAGATTGCAAAGATGGTGGCTACCATCCATTTTGGACGAGTATCAAAGTTTTGCAGCCGCCAAAGCCAGAGTGTCAGATAAGAGTTTCATAGCAACGTTTGATATTTCTGGTTTTAAGCCGCAGCCATTGTCATTTTCATCCTCGCAAAAATACAGTGTTGACAAAGTCCAGGATGCTGTTCCATCCTCCCCCTGA 669 0.4753 MTLDISNGEFLRMASEAPESFTVDMLQPRTSVKNGDGNGTGGEEMLMPPLNFGMVDYGIFRSGFPDSASFGFLRSLSLRSIICLFPDEYPEANLEFLKANGIRLYQFGIDGSKDPLTKVPEESIREALEVILDVGNRPLLIHCKRGKHRTGCLVGCLRRLQRWWLPSILDEYQSFAAAKARVSDKSFIATFDISGFKPQPLSFSSSQKYSVDKVQDAVPSSP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0429 222 PANTHER TYROSINE-PROTEIN PHOSPHATASE 45 197 - -
Lele35g0429 222 MobiDBLite consensus disorder prediction 201 222 - -
Lele35g0429 222 Pfam Tyrosine phosphatase family 46 201 IPR004861 -
Lele35g0429 222 FunFam probable tyrosine-protein phosphatase At1g05000 45 195 - -
Lele35g0429 222 Gene3D Protein tyrosine phosphatase superfamily 45 195 IPR029021 -
Lele35g0429 222 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 209 IPR020422 GO:0006470|GO:0008138
Lele35g0429 222 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Lele35g0429 222 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Lele35g0429 222 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Lele35g0429 222 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Lele35g0429 222 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Lele35g0429 222 CDD PFA-DSP_Siw14 45 192 - -
Lele35g0429 222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 182 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0429 Lele-ChrLele35 2669356 2671868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0429 41 210 Protein tyrosine phosphatase (PTP) family AT4G03960 63.529 6.03e-81 238