Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0428 ATGGGGAAATCCGGGGGTAGAAAAAAGAAGGGTGGTTCAAATCAAGTTGTTCCTGATAATTCAGCTCCGAGTGCTAATGGTGGTGTGGATTTGGACTCTTCAATCTTTTTGAAAAGAGCCCTTGAGCTCAAGGAAGAAGGGAATAAGAGGTTCCAAAACAAGGACTATACTGGTGCTCTTGAGCAGTATGAGAATGCTCTTCGACTAACCCCTAAGACCCACCCTGAGAGAGCCGTCTTTCACAGCAACAGAGCGGCGTGCTTGATGCAAATGAAGCCCATAGATTACGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTCCAGCCCCAATACGTTCGGGCACTTCTTCGGAGGGCTCGGGCATTTGAGGCTATAGGGAAGTATGAAATGGCCATGCATGATGTACAAGGCTTACTGGCAGCTGACCCTAGTCATCGGGATGCTCTGGATATTGCCCAGAGACTGAGGACAGCACTAGGTCCTCGCCAGGAATCCCAGCAAGATCTTCAGAGTCGGCCCTCCCCTGCTGCTCTTGGTGCTTCTGCAGTCCGTGGTGCCCCTATTGCTGGTTTAGGGCCATGTTTACCAGCCAGGCCAGTATCAAAGAAAGGGGCAAACTCAGCAGGTGGATCAGTTGCTCCTGCTAACAGTAAACCAGAGAAGTCCCAACCCACATTAGTTACTGAAAATGGCCCTGAGACCAAGTTGCAAATGCCAAACGTTACGTTGAAGCCTTCAAATGCTTCAGCAAGATCACTGAACCCAAGAAAAGAGAACCACAATGAATTGTCGTCGCATTCATCAATTGCACATGGACAGCATTTAGAATTTGCAATTCAGGGGAGGCCATTGAAACTTGTTTATGATCATGACATTAGGCTTGCTCAGATGCCAGTGAATTGCAATTTTAGATCACTGAGAGATATAGTGAGTAAAAGATTTCCATCATCAAAGTCAGTTCTGATCAAGTATAAGGATAGCGATGGCGATTTGGTGACAATAACCTCTACTGATGAACTTAGACTGGCAGAATCTAGTGCTGATAGCCATCTTATAAAAGTGCCTGATGCCAATAAAAGTGATTCGGTTGGCATGTTGAGACTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGAAGTAAAACCTGTTGAGAGTGAAGGCATCAAGGGAGATGAGAGTGGGTCACATACTTCCCAAAGTGAATCTGTCCCAGAGGCTCTGGAGACTGAGGTTGATAAGGTGGGGAAAGAAGCTCCCAAAGAGAAACCAGTAGCTACAGAAGATGCCGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTTCGCTCTCATGTGGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCAGAGGCACTTGAGGAAACGGTAACTAGTGAGGAGGCTCAAGATCTCTTTAACAAAGCTGCTTCTAAGTTCCAGGAGGTAGCTGCTCTGGCATTCTTCAATTGGGGAAACATTCACATGTGTGCAGCTAGGAAACGAATTCCCTTGGACGAGTCAGGCGTGAAGGAAAAAGTGGCAGAACAGCTTCAAGTGGCTTATGACTGGGTCAAGGAAAAATATTCATTGGCAAGAAAGAAGTACGAGGAAGCCCTTTTAATAAAACCAGACTTCTATGAGGGATTGCTAGCTCTGGGGCAGCAACAATTTGAAATGGCCAAACTTAATTGGTCATTTGCACTTGCTAAGAAGATGGATTTATCAGCCTGGGATTCTTCGGAGACGCTTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCCGCGACTGATATGTGGGAAAAGCTGGAGGAACAGAGGGAAAATGAGCTAAAAGATCCTAGTGCAAGCAAGAAAGAGGAACTACTGAGAAGAAGAAAAAAACAGGGAGGAGCTACCCAAGGCGAGACCTCTGCAGTCGGTGGTCATGGTGAAATATCTGCAGAAGAAGCTGCAGAGCAAGCAGCTGTCATGAGATCACAGATTCACCTCTTCTGGGGCAATATGCTATTTGAAAGATCCCAAGTGGAATGCAAATTAGGGATGGGTGGTTGGAAGAATAATCTGGATACAGCTGTTGAGCGTTTTAAACTTGCAGGAGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAAGGGGGATGCAAAGGAAGATGAGAAAAAGATTCAGAACCCCCAACCCAGCAAGAATGGTGAAACTGACAAGACCAGCGAGACCAGGCAGATGTTACGCAAAGCATGTGTCCGAAATCGCTTGTATCAAATGCATAGAGAAAATCCATTTCGCTTGTATCTCTACTTCTACAGTGAGCCGCCATCCCATATTCTAGGTGTTTGGATCACATTCTTTGCTCCCCACGTTGACTTGACTTGGACCCAAAAGTCTGATCTGTCCCCGCATATTCTCCCCAAGGAGAAAACGGCATTTCGGGCTATAACCGTCTTTACACTGCTCTTTACGGGGTCGTTTCATCTTGGCTCTCTGCCCTTGCTCCTCACTGTAGCTCTTGAGGTTCCTACCCCCTTCTCAGGAGAAGAATATGCCCAAAATGTGCATCTTCGTTGGAACTGA 2652 0.4615 MGKSGGRKKKGGSNQVVPDNSAPSANGGVDLDSSIFLKRALELKEEGNKRFQNKDYTGALEQYENALRLTPKTHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQYVRALLRRARAFEAIGKYEMAMHDVQGLLAADPSHRDALDIAQRLRTALGPRQESQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVSKKGANSAGGSVAPANSKPEKSQPTLVTENGPETKLQMPNVTLKPSNASARSLNPRKENHNELSSHSSIAHGQHLEFAIQGRPLKLVYDHDIRLAQMPVNCNFRSLRDIVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESSADSHLIKVPDANKSDSVGMLRLHIVEVSPEQEPPLPEEEEVKPVESEGIKGDESGSHTSQSESVPEALETEVDKVGKEAPKEKPVATEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFNKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGVKEKVAEQLQVAYDWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSAWDSSETLQLFDSAEEKMKAATDMWEKLEEQRENELKDPSASKKEELLRRRKKQGGATQGETSAVGGHGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKNNLDTAVERFKLAGASEADISLVLKNHCSKGDAKEDEKKIQNPQPSKNGETDKTSETRQMLRKACVRNRLYQMHRENPFRLYLYFYSEPPSHILGVWITFFAPHVDLTWTQKSDLSPHILPKEKTAFRAITVFTLLFTGSFHLGSLPLLLTVALEVPTPFSGEEYAQNVHLRWN 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0428 883 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Lele35g0428 883 MobiDBLite consensus disorder prediction 202 268 - -
Lele35g0428 883 CDD PB1 286 372 - -
Lele35g0428 883 MobiDBLite consensus disorder prediction 1 28 - -
Lele35g0428 883 MobiDBLite consensus disorder prediction 383 400 - -
Lele35g0428 883 SMART PB1_new 283 375 IPR000270 GO:0005515
Lele35g0428 883 MobiDBLite consensus disorder prediction 375 438 - -
Lele35g0428 883 MobiDBLite consensus disorder prediction 741 767 - -
Lele35g0428 883 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Lele35g0428 883 Pfam PB1 domain 285 374 IPR000270 GO:0005515
Lele35g0428 883 MobiDBLite consensus disorder prediction 628 668 - -
Lele35g0428 883 Gene3D Tetratricopeptide repeat domain 37 166 IPR011990 GO:0005515
Lele35g0428 883 MobiDBLite consensus disorder prediction 212 256 - -
Lele35g0428 883 MobiDBLite consensus disorder prediction 415 438 - -
Lele35g0428 883 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Lele35g0428 883 PANTHER PROTEIN CLMP1 1 768 IPR044517 -
Lele35g0428 883 SMART tpr_5 114 147 IPR019734 GO:0005515
Lele35g0428 883 SMART tpr_5 40 73 IPR019734 GO:0005515
Lele35g0428 883 SMART tpr_5 78 113 IPR019734 GO:0005515
Lele35g0428 883 MobiDBLite consensus disorder prediction 14 28 - -
Lele35g0428 883 SUPERFAMILY TPR-like 489 586 IPR011990 GO:0005515
Lele35g0428 883 MobiDBLite consensus disorder prediction 628 654 - -
Lele35g0428 883 SUPERFAMILY CAD & PB1 domains 286 356 - -
Lele35g0428 883 Coils Coil 609 636 - -
Lele35g0428 883 Gene3D - 285 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0428 Lele-ChrLele35 2663694 2667309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0428 30 161 Calmodulin-binding Proteins AT3G25230 27.273 1.61e-10 62.8