Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0420 ATGGCTTTTGTGGGAGAGAATATTAGTGGTGGTGGTGGTGGTCTAGTATGTTCTCAGACGATGATGGATATGCCTATAGTGACATCTCATCATCCAAGTGGTCATCATCATCCACTAATTAATCCTAATGCTAATACACAACACACTAATTTAAACACTACTAGTAATACTATTTTCTTCCCCACACCTTGCACTATTAACGGTACCTCTTCCTCTTCCTCCTTTATTATGCTTCAAAACAACAACTTAAACTACAGCAGCAGCAACACTGGGTTAAGCTTTGGCTGTTGTTTCATGGACATCGTCTTCGACAACAACGTTAACAGCAGCAACAACGATGTTAGTTCCTCTTCTTGTTCTTCTGTGAAGGCCAAGATCATGGCTCATCCTCACTACCTTCGTCTTCTCGCTGCTTACGTCAATTGTCAAAAGGTGGGCGCACCGCCGGAAACTGTGGCGAGGCTGGACGAAGCATATGCGGCGGCGGTGGCGGCAATGGGCGGCAACGGAGGTGGGTCAGGCAGCACCGGCGAAGATCCGGCGCTGGATCAGTTCATGGAGGCATACTGTGAGATGTTGACAAAGTACGAGCAAGAGCTTTCCAAACCCTTCAACGAAGCTATGTTCTTTCTTCAGAACATCTTTCCTTTTGGGGAACCGAGTAGGAAGGTCTGGTGCACAATTTTCGCTGTGTTTGGTAAATGTGAATTTGCCGACATTAGTGTGTATAGAGAGATGAACACATCTGGGACCAGTACAACACAAGACTTGGTCAAGGAGAAAAAGCTATTTGTAGGAATGAACTTAGGAATCTAA 816 0.4547 MAFVGENISGGGGGLVCSQTMMDMPIVTSHHPSGHHHPLINPNANTQHTNLNTTSNTIFFPTPCTINGTSSSSSFIMLQNNNLNYSSSNTGLSFGCCFMDIVFDNNVNSSNNDVSSSSCSSVKAKIMAHPHYLRLLAAYVNCQKVGAPPETVARLDEAYAAAVAAMGGNGGGSGSTGEDPALDQFMEAYCEMLTKYEQELSKPFNEAMFFLQNIFPFGEPSRKVWCTIFAVFGKCEFADISVYREMNTSGTSTTQDLVKEKKLFVGMNLGI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0420 271 SMART KNOX2_2 172 227 IPR005541 GO:0003677|GO:0005634
Lele35g0420 271 Pfam KNOX1 domain 122 159 IPR005540 GO:0003677|GO:0005634
Lele35g0420 271 SMART KNOX1_2 120 164 IPR005540 GO:0003677|GO:0005634
Lele35g0420 271 Pfam KNOX2 domain 176 214 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0420 Lele-ChrLele35 2581377 2583326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0420 122 214 Homeobox Transcription Factor Family AT1G62360 75.269 3.74e-39 139