Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0416 ATGGAGAATAGATATTCTATGCCTAGAATTCTAGTTACTTGCCATGCCAAGAGTGCAAATACCTTGGATGCAGCAAGAAGACTAGCATACATCCATGAGCAAACAGTTCCTGTCTACATCCATGGAGACATTAAATCTCCGAACATATTGATTGACAAAAACTTCCGAGGAAAGGTTGCAGATTTTGGTCAGACAAATTTGACAGAATATGGAAGTTCTTCAATGCCATCACATCTTGTGGAGCCTTTGCTTGATATTGGAAAATACACTCAGCACAGTAGACTAGCTAAGAAGCAGGATTATTTCTGTACCTGGGATTTCATTTCTGCGGTTAAATTGAATAAATGGCTACGCTAG 357 0.3922 MENRYSMPRILVTCHAKSANTLDAARRLAYIHEQTVPVYIHGDIKSPNILIDKNFRGKVADFGQTNLTEYGSSSMPSHLVEPLLDIGKYTQHSRLAKKQDYFCTWDFISAVKLNKWLR 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0416 118 Gene3D Transferase(Phosphotransferase) domain 1 4 101 - -
Lele35g0416 118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Lele35g0416 118 Pfam Protein tyrosine and serine/threonine kinase 19 68 IPR001245 GO:0004672|GO:0006468
Lele35g0416 118 SUPERFAMILY Protein kinase-like (PK-like) 21 74 IPR011009 -
Lele35g0416 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0416 118 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 21 80 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0416 Lele-ChrLele35 2552041 2559707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0416 21 74 Receptor kinase-like Gene Family AT3G21630 70.370 1.27e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele35g0416 PK_Tyr_Ser-Thr 2.6e-05 CL0016