Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0405 ATGTATACGGGCCTGCAACTTCTTACTGCTCATACTGGGAGCGATCAGTCTACGGTGGACGACGGAGTTTCATCGGATGCTGAAATTAAGCGAGCCAAGAGTTCAACAGAGTTGGCGCAGCTGAAAGAGGAGCTTCAGCGTATGAATGCGGAAAACCTGAAGCTGAGGGACATGTTGAGCCACGTGAGCAGTAATTACTCGGCTCTGCAAATGCATCTCGTCGCATTAATGCAGCAGCAGCAGCATCAGATTCAACAACGTACTCAGAGCACAGCAAATGAGGTTGTTCGATCAAAACCTGATGACAAGAGAGAGATTGTATCGATGCCGCTTCTGGAATTGGGGCCTAGTAGTGGAACAGCTGAAGTAGATAACGAGGTCTCCAATTCAACTTCCGATGAAAGAACACGATCCACCACCCCTCCTATTAACAACATCAATGGTAAAAATGAAAGAGAAGAGAGTCCAGACGAGTCAGATGTTCAGCCCCAAGGATGGGGCACTGGTCCTAACAAGCTTCAGAAGCCGAACCCCTCACCGAACTCCGCCGACCCATCAACCAGTACCACCACCGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCAGAAGCCCCCATGATCAGTGACGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCATGCCCTCGTGCTTACTATAGATGCACCATGGCGGTCGGTTGCCCAGTTCGCAAACAAGTACAGCGTTGCGCGGAGGACAGGACGATTTTGATAACTACCTATGAAGGAAGCCATAACCATCCGCTGCCACCTGCGGCGATGGCGATGGCATCAACAACCACGGCGGCGGCTAGCATGTTGTTGTCGGGTTCAATGTCGAGTGCAGACGCAATAATGAATCCGAATTTGCTGGCCAGAGCTATTCTTCCTTGTTCGTCGACTAGCATGGCTACGCTTTCGGCTTCAGCTCCGTTTCCTACCATAACATTGGACCTCACTCACAATTCAAACGGTAACATGAACAACCCTATGCAGTTCCAGAGACCACCGTTTCAGGTACCTAATCTCCAAGGGCAGCCTCAAGTTCAACAACCAACCGCGTTGGGTCAGCATCAGTTGGCTCAGGCATTTTCACAAGCACTTTACAATCAATCCAAGTTCTCCGGCCTTCACTTGTCTCAGGATATGGGTTCGTCTTCTTCATCTTCTTCCCAATTAGCCAACCAGCAACCTCCCAGGCCGGTGCAGCAAAGCCAACAGCCGCAGCCATCGTTGGCAGACACCGTCAGCGCGGCCACAGCAGCCATCACCGCCGACCCAAACTTCACAGCAGCACTCGCGGCTGCCATCTCCTCCATCATTAATGGCGGCGGTGTTCCCCCGAGCAACAACAACAACACCAATAGCAGCGGCAATCCCAACATCCCCGGGGGCACCACAATCAGCAGTTTCTCAGGGAATCACTAG 1476 0.519 MYTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELAQLKEELQRMNAENLKLRDMLSHVSSNYSALQMHLVALMQQQQHQIQQRTQSTANEVVRSKPDDKREIVSMPLLELGPSSGTAEVDNEVSNSTSDERTRSTTPPINNINGKNEREESPDESDVQPQGWGTGPNKLQKPNPSPNSADPSTSTTTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADAIMNPNLLARAILPCSSTSMATLSASAPFPTITLDLTHNSNGNMNNPMQFQRPPFQVPNLQGQPQVQQPTALGQHQLAQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLANQQPPRPVQQSQQPQPSLADTVSAATAAITADPNFTAALAAAISSIINGGGVPPSNNNNTNSSGNPNIPGGTTISSFSGNH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0405 491 MobiDBLite consensus disorder prediction 464 491 - -
Lele35g0405 491 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g0405 491 Gene3D WRKY domain 197 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g0405 491 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g0405 491 FunFam probable WRKY transcription factor 31 197 274 - -
Lele35g0405 491 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 472 IPR044810 GO:0003700
Lele35g0405 491 MobiDBLite consensus disorder prediction 161 195 - -
Lele35g0405 491 MobiDBLite consensus disorder prediction 84 195 - -
Lele35g0405 491 MobiDBLite consensus disorder prediction 337 371 - -
Lele35g0405 491 MobiDBLite consensus disorder prediction 395 428 - -
Lele35g0405 491 Pfam WRKY DNA -binding domain 214 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele35g0405 491 SUPERFAMILY WRKY DNA-binding domain 205 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele35g0405 491 Coils Coil 24 58 - -
Lele35g0405 491 MobiDBLite consensus disorder prediction 121 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0405 Lele-ChrLele35 2477099 2479158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0405 3 471 WRKY Transcription Factor Family AT1G62300 54.713 1.16e-140 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele35g0405 WRKY 4.8e-24 CL0274