Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0403 ATGGGGTGGACTAGGGGGCACACCATCGGCCGGGGTTCCACCGCCACCGTGTCGGTTGCAGAGTTTCGTGGGTCTGGTCGGATGTTAGCGGTGAAGTCGGTGGAGCTCCAACGGTCGGAATTTCTCAGGAGAGAACAGAGTATTCTCTCCACATTGGAGTGTCCTCATATTGTAGCATACGAAGGTTGTGATACCACATTTGAAAATGGCGCCTTCATGTATAACTTGTTCATGGAGTATGCGCCTTACGGGTCAATCGCAGACGACATTCGCGAGCGTGATGGTGGGTTGGATGAGATTTTGGTTGGACGTTATGCTCGTCAGATTCTGCTTGGGTTAAACTACTTGCATTCCAATGGGATTGTGCATTGTGATTTGAAAGGCCAGAATGTTTTGCTCACCGATGAAGGGGCTAAAATTGCCGACTTGGGTTGTGCCCGGAGAGTTGCGGCGGCACAGGATTATGGTGGTGGGGGGTTCCCTGCCGACGTGTGGGCTCTTGGCTGTACTGTGCTGGAGATGATCACCGGAAAAGCACCGTGGCATGACGTTTCCGACCCGGTAAGTGTCCTGTATCGAGTCGGATTCTCCGGCGAGGCGCCGGAGATTCCGAATTCCTTGTCAGAGCAAGGGAAGGATTTTGTCACCATGTGTTTGAAAGCAGATCCGAACGAGAGGTGGTCAGCAGATGAGCTTCTTAAACATGAGTTCGTTCAGGATTCAAGCAGTGTCTCGAAGAAATTTGATGATTCTAGTTCAAATTCTCCAACTAGTGTGTTGTTGGATCGAGGTTTCTGGGACTCGTTTGGCGAGTTGCAGAAAACCCCAACACGGGATCCGAACCCGAACCCGACCCATGGTCACGTCTGTTCTTGGGATCCTCCTAGTCCCAGAAGCAGAATTCGTAGGTTGTCTTCCTCTACACCCAATTGGGAAAGTGATGACAAATGGATCACAGTAAGAGACAGCAGCATCAGAGAGTTCAATGGCGGAGAATCTAATGAAGAAACAGCGACCTGTGGATTAGACAGTTCAAATTACATTAGAGAGGACAATTATTTGGTTGTTACTTGTGAACCCAGAACACTTCATTCTATTTCAGCAATGAAGTCTAAAAATTTGAAGTCAAAGCAAAAACTTCTTCTCTTGAAGAACATGTTGGGGAAGATTGATAGCCTCTTGTGTCAGCATAGTGCCATGGTAACTGTTGAAAAATATGTAACAATATTCATTAAACAATTCCAGCTCATGTCAAATATACAAATGTTGTTGGAAATCAGAAGTAGTTACAATGTTAGTGAGGAAAGGACCATAGAAATTTTAAGGCCATCAAGATCAGACTATAAGAACTGCCACATAGCACTAGAATCTGGATAA 1377 0.4648 MGWTRGHTIGRGSTATVSVAEFRGSGRMLAVKSVELQRSEFLRREQSILSTLECPHIVAYEGCDTTFENGAFMYNLFMEYAPYGSIADDIRERDGGLDEILVGRYARQILLGLNYLHSNGIVHCDLKGQNVLLTDEGAKIADLGCARRVAAAQDYGGGGFPADVWALGCTVLEMITGKAPWHDVSDPVSVLYRVGFSGEAPEIPNSLSEQGKDFVTMCLKADPNERWSADELLKHEFVQDSSSVSKKFDDSSSNSPTSVLLDRGFWDSFGELQKTPTRDPNPNPTHGHVCSWDPPSPRSRIRRLSSSTPNWESDDKWITVRDSSIREFNGGESNEETATCGLDSSNYIREDNYLVVTCEPRTLHSISAMKSKNLKSKQKLLLLKNMLGKIDSLLCQHSAMVTVEKYVTIFIKQFQLMSNIQMLLEIRSSYNVSEERTIEILRPSRSDYKNCHIALESG 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0403 458 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Lele35g0403 458 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lele35g0403 458 MobiDBLite consensus disorder prediction 271 307 - -
Lele35g0403 458 SMART serkin_6 3 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0403 458 CDD STKc_MAPKKK 3 238 - -
Lele35g0403 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele35g0403 458 Gene3D Transferase(Phosphotransferase) domain 1 156 249 - -
Lele35g0403 458 Gene3D Transferase(Phosphotransferase) domain 1 88 155 - -
Lele35g0403 458 Pfam Protein kinase domain 160 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0403 458 Pfam Protein kinase domain 4 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0403 458 ProSiteProfiles Protein kinase domain profile. 3 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0403 458 SUPERFAMILY Protein kinase-like (PK-like) 3 282 IPR011009 -
Lele35g0403 458 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0403 Lele-ChrLele35 2458493 2461635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0403 3 321 MAP Kinase Kinase Kinase AT5G55090 46.512 2.16e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele35g0403 Pkinase 1.3e-28 CL0016