Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0385 ATGGGCTGTCACAGTAGCAAGGAGAAAAAATCAAATGCGGAAATTAGTGGCTATGGATCAGCCACGGGTAGTGTTGGCAGTACCCATCAAAGTTACCACACTGTCCAGCCTCCTTCTACTCAAATCCAGACTCAGATTCGAACATCAGAATCCAAGCCCCAACCGCCGCCGCCGCCTTCATCGCAGCCGCCCGTGACTGTCCCAGCGAAACCCACTTCCTCGAATGTCAGACCCCCGCAGCAGAAGCCAGAAGTTACGATTCTGGGAAAGCCTCTTGAAGATGTTAAGAAATTCTACACTCTGGGCAAAGAACTTGGAAGAGGGCAATTTGGGATTACCTATTTGTGCACTGAGAATTCCACCGGCCGCACTTATGCGTGCAAATCGATATTGAAGAGGAAGCTTGCATCTAAAGCGGATAAAGAAGATATGAAGAGGGAAATTCAGATTATGCAGCATTTATCTGGGCAACCGAACATTGTCGAGTTTAAGGGTGCTTATGAAGATAGATATTCTGTGCACCTTATAATGGAGCTTTGTGCTGGTGGGGAGCTATTTGACCGAATCATAGCTCAAGGTCAATATTCAGAGAGAGCTGCTGCATCAATTTGTAGAGCTATTGTTAATGTTGTGCACATTTGCCACTTCATGGGGGTGATGCATCGTGATCTGAAGCCTGAAAATTTTCTGCTTTCTAGCAAAGATGAGGGAGCAACGCTTAAGGCTACTGATTTTGGACTATCTGTTTTCATTGAAGAAGGGAAGGTTTACCGAGATATGGTAGGTAGTGCTTATTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAAGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTCCTTAGTGGTGTACCTCCTTTTTGGGCTGAAAATGAAAAGGGAATATTTGATGCTATATTGGAAGGCAAAATTGACTTTGAAAGTCAACCATGGCCCTCAATATCAGACAGTGCTAAAGATTTAGTCAGGAAGATGTTGACTCAGGACCCAAAGAAGCGAATTACTTCTGCACAAGTCCTTGAACACCCATGGATCAGAGAAGGTGGAGAGGCATCAGATAAGCCAATCGACAGTGCAGTTCTATCGAGAATGAAGCAATTCAGGGCAATGAATAAGCTCAAAAAGCTCGCGCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAGGAGATTAAAGGTCTCAAAGCAATGTTCACCAATATGGACACTGACAATAGTGGTTCTATCACCTATGAAGAACTGAAGACAGGTTTAGCCAGGATTGGATCACAACTGTCCGAGGCTGAAGTGAAGCAACTCATGGACGCTGCTGATGTTGATGGAAATGGAACAATCGACTATATCGAATTCATCTCAGCTACAATGCATAGGCATAGACTTGAGCGAGATGAGCACTTATACAAAGCCTTTCAGTATTTTGATAAGGATAACAGTGGGTTTATTACTAGAGATGAATTGGAGACTGCTATGACACAGCATGGAATGGGTGACGAAGCGACAATTAAGGATATAATATCCGAGGTGGATACAGATAACGATGGGAGAATAAACTATGAGGAATTCTGCACAATGATGAGGAGTGGAATGCAACATCAAGGACCACTTTTTTAA 1644 0.4331 MGCHSSKEKKSNAEISGYGSATGSVGSTHQSYHTVQPPSTQIQTQIRTSESKPQPPPPPSSQPPVTVPAKPTSSNVRPPQQKPEVTILGKPLEDVKKFYTLGKELGRGQFGITYLCTENSTGRTYACKSILKRKLASKADKEDMKREIQIMQHLSGQPNIVEFKGAYEDRYSVHLIMELCAGGELFDRIIAQGQYSERAAASICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAENEKGIFDAILEGKIDFESQPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWIREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDNSGSITYEELKTGLARIGSQLSEAEVKQLMDAADVDGNGTIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGFITRDELETAMTQHGMGDEATIKDIISEVDTDNDGRINYEEFCTMMRSGMQHQGPLF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0385 547 FunFam calcium-dependent protein kinase 1 185 364 - -
Lele35g0385 547 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Lele35g0385 547 MobiDBLite consensus disorder prediction 51 66 - -
Lele35g0385 547 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Lele35g0385 547 MobiDBLite consensus disorder prediction 12 50 - -
Lele35g0385 547 MobiDBLite consensus disorder prediction 1 88 - -
Lele35g0385 547 Gene3D Phosphorylase Kinase; domain 1 101 184 - -
Lele35g0385 547 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Lele35g0385 547 Pfam EF-hand domain pair 475 537 IPR002048 GO:0005509
Lele35g0385 547 Pfam EF-hand domain pair 405 465 IPR002048 GO:0005509
Lele35g0385 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele35g0385 547 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Lele35g0385 547 SUPERFAMILY EF-hand 396 536 IPR011992 -
Lele35g0385 547 FunFam Calcium-dependent protein kinase 1 365 540 - -
Lele35g0385 547 ProSiteProfiles Protein kinase domain profile. 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0385 547 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Lele35g0385 547 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Lele35g0385 547 SMART efh_1 440 468 IPR002048 GO:0005509
Lele35g0385 547 SMART efh_1 476 504 IPR002048 GO:0005509
Lele35g0385 547 SMART efh_1 404 432 IPR002048 GO:0005509
Lele35g0385 547 SMART efh_1 511 539 IPR002048 GO:0005509
Lele35g0385 547 FunFam Calcium-dependent protein kinase 1 101 184 - -
Lele35g0385 547 Gene3D Transferase(Phosphotransferase) domain 1 185 364 - -
Lele35g0385 547 ProSitePatterns Protein kinases ATP-binding region signature. 105 132 IPR017441 GO:0005524
Lele35g0385 547 MobiDBLite consensus disorder prediction 67 81 - -
Lele35g0385 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 93 532 - -
Lele35g0385 547 Gene3D - 365 542 - -
Lele35g0385 547 ProSiteProfiles EF-hand calcium-binding domain profile. 508 542 IPR002048 GO:0005509
Lele35g0385 547 SUPERFAMILY Protein kinase-like (PK-like) 74 378 IPR011009 -
Lele35g0385 547 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Lele35g0385 547 Pfam Protein kinase domain 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0385 547 SMART serkin_6 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0385 547 CDD STKc_CAMK 98 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0385 Lele-ChrLele35 2327431 2331322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0385 1 547 EF-hand Containing Proteins AT4G04720 75.136 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele35g0385 Pkinase 8.8e-74 CL0016