Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0371 ATGGATTGTTTCCCATGCTGCAATAAGCAAGAACTTGAAACGGATCCTTTGAGCAAAAGTAGCAAGGGTCATGCACAATCCAGGAAATCCACGTTCAAATCTTTTTTGGGGGCTCTCTCTACCAAAACAGGTAGCAGCAGACAGAGACACATTACAGCTGAGATACGAAAATATGGAACAGCGAAGAACAATTCCCGAGTTTTCACAGTTCAAGAACTCGCCTCTGCAACTGACAACTTCAGTAATGACTGTTTGATCGGTGAAGGTGGTTTTGGCAGTGTCTACAAAGGATACATACAAAGTCTTAATCAAGCCGTGGCTGTGAAGAGACTGGACAGGAACAAAATGCAAGGAAGTAGAGAATTCTTTTCAGAAGTTGTAACGTTGAGTTTGGTAAAGCACCCCAACCTCGTCAAGCTCATAGGTTATTGTATTGAAGGAGATCAAAGGATGTTAGTTTATGAATTGATGGTCAATGGCAGCCTCGAAAGTCACCTTCTAGATTTAGGAGCAGATAAGGAGGGATTGGATTGGGCAACGAGGATGAAAATAGCAGAAGGAGCAGCGAGAGGAATGGAAGTCTATGATACTGCTAGGGCAGAAGAAGAGCAAAACCTTATTGACTGGGCACAGCCAATGCTAGAGGACAGAGAGAAGTTCACACTAATGGCAGATCCATTGCTGAAGGATAACTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCAGACACAAGGCCATTGATGAGTGATGTGGTCACAGCGCTTCAGCACATAACACAACCACCAGTAAATGGTGCAGAAAATGATGAAAATAATAACAACAACAAAGGACAATCTGTAAAAATTGCAGGCCATGTTGAATCATTTAGGGTTGGAAGCACACGTGTAGACAATCTACAACATCAAATAAAGCTTGGAAGTTCAAGTGTACAACATCAAAGACATGGAAGTTCAAGTGTTGGAGGCCATCATCAACACCACGGGATTGGAAGTTCAATAGGTCATCAACAACATCACAGGCATGGAAGTTCAAGTGTTGGAGGCCATCAACAACATCCCAGGCTTGGAAGTTCAAGTGTTGGTGGCCATCAACAGCATCACAGAGCTGGAAGTTCAACAAGTGTTGGAGGCCATCAACAACATCATAGGGCTGGAAGTTCAAGTGTTGGCCAATAA 1206 0.437 MDCFPCCNKQELETDPLSKSSKGHAQSRKSTFKSFLGALSTKTGSSRQRHITAEIRKYGTAKNNSRVFTVQELASATDNFSNDCLIGEGGFGSVYKGYIQSLNQAVAVKRLDRNKMQGSREFFSEVVTLSLVKHPNLVKLIGYCIEGDQRMLVYELMVNGSLESHLLDLGADKEGLDWATRMKIAEGAARGMEVYDTARAEEEQNLIDWAQPMLEDREKFTLMADPLLKDNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHITQPPVNGAENDENNNNNKGQSVKIAGHVESFRVGSTRVDNLQHQIKLGSSSVQHQRHGSSSVGGHHQHHGIGSSIGHQQHHRHGSSSVGGHQQHPRLGSSSVGGHQQHHRAGSSTSVGGHQQHHRAGSSSVGQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0371 401 SUPERFAMILY Protein kinase-like (PK-like) 62 193 IPR011009 -
Lele35g0371 401 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele35g0371 401 MobiDBLite consensus disorder prediction 340 401 - -
Lele35g0371 401 ProSiteProfiles Protein kinase domain profile. 80 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0371 401 PANTHER OS07G0668900 PROTEIN 3 193 - -
Lele35g0371 401 Gene3D Transferase(Phosphotransferase) domain 1 194 293 - -
Lele35g0371 401 Gene3D Phosphorylase Kinase; domain 1 40 156 - -
Lele35g0371 401 FunFam serine/threonine-protein kinase PBS1-like 46 156 - -
Lele35g0371 401 Pfam Protein tyrosine and serine/threonine kinase 85 193 IPR001245 GO:0004672|GO:0006468
Lele35g0371 401 MobiDBLite consensus disorder prediction 316 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0371 Lele-ChrLele35 2250385 2253985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0371 191 272 Glycoside Hydrolase AT3G07070 56.098 9.54e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele35g0371 PK_Tyr_Ser-Thr 3.9e-19 CL0016