Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0359 ATGGACCCTCAAAATTTCTTATTTTCCCGAGAAAACCCTAGACCCCTCTCGTTCGCTACTGCTTCGATTGTCTCTTCAAAACCCAATATCCCCAATGAGATCGCGCAGAAGCCTTCCCCATCGATTCTAGTGGGCCGGTTCAAGGCTTTGCTAAAGGAACGCGAGGATGAATTCAGGGCTTCCTCCGGTGATGACGTGCCGGTGCCACCCCCTAGCACTGAAGAAATTGTGCAAATTTACCAGTTGTTGTTGTCGGACCTCACTTGCAACTTAAAGCCTATCATTACGGATCTTACCGTTATTGCTGAACTTCAGGTAGAGCATGCCAGAGGCATCGCCGATGCAATTTGCACTCGGATTCTTGAGGTGCCTGCAGATCAAAAGCTGCCGTCCCTCTATCTTTTGGACAGCATTGTGAAGAATGTTGGTCAGGGATATATTAGATACTTCTCTTCATGTCTGCCTGAAATTTTCTGTGAGGCATACAGGCAGGTTCATCCTAAGCTGCATAATGCTATGCGCCATCTCTTTGGCACCTGGTCAACTGTCTTTCCACCTTCTGTCCTACGCAAGATTGAAGCTCAACTGCAGTTTTCTCTAGCAATTAATAGTCGGTCATCTACAATTGATCCCCTTAGGGTGTCTGAATCTCGTCAAGCAACTCATGGCATACATATCAATCCAAAGTACTTGCAGCAGTTGGAACACTCTACTATGGATAGTGTTGGAGGTGAAAAATTGGAATCAACAGTAAATTTGGGTCTTGCGAATTTTGGCCGTGGAGCTAGTAAGATGCATCAACCTTTATCTAGAAGGCTTGGGAGATCTTCACCTTCAGAAATTGGACTTGATAGGCCTCTGTCAGCAACTATAGATGAGTGTGTGGTTGACAATTCTGCTGGCATGGTAGCTGAGAGAGATCATCTTTCTCATCCTGCATCTGATTATGGAGTTGGTAAAGCTGGAAGTAGAGGTGAAGAGTTGAGTGGGTGGAAACAAAAACATTATTCTGATGATGGTCGGAACCTGTTTCAAGTTTCTATGTCATCTAGTCTTAGTAATGGGCATCAGCGTCAAAATCTTAAAGCTTTAATAGATGCATATGGGAGCGATAAAAAAGAAACCTTCAATAATAAGCCTTTGTTGGTTGAACATCAGGACACAAATGGTTTAAACAAGGTTGTGTCAACATCATGGCAAAACACTGAAGAGGAGGAATTTGATTGGGAAGATATGAGTCCAACGTTAGTAGACCATAATAGGAACAATGAATTCTTACCATCAAGAATTGGTTTCTCCAGGGAAAAGCCTGTTACTAATGCAGCTACTTCAGAGCGGGATCCTAGGCGTAGTTGGTCTAGTCGGTCGCAGCTACCACCAATGGACAATTCCTCTGTTATAGCAGGAGATAAACTTGTTTATTCAAGTTATGGTCGTGGATCACCAGTTCAGGCATCTGGATACCAAAATCAAACAAACCAAAGTTTAAGCTCCCGTCCACCTGTTGATGCTTGGAATGTTAGAGGTCGAGTGAGCAATAGTCAGATATCCCCTGTCAGTAACATTCCAAATAGTGATATAAACCTATATGGGACTCAGTCAGCTTTGTCCAGAATGGGTTCCGCACTTGAGTCTACTATGGAGATTCGTCCAACAGTTTTACCAGCATCTCTTGGAATGAGGCCAGCAGTTAATGCTCATGCTGTTCGCCCTTCCACCTTAAACCATACAGTTCCCTTGGATAAACATGTTAAGAGTCAGTTTGAGCCAATACATTCTAGCAGCACCATTGTAAATAATGGTCAAAATAATTCTTCATTTTTGGACGGTGTTGAGAACAAGTTTACAGATCTATCAAAGCTGCATCAGCTGCCAACCCAGCTAGCTAGGCGGATTTCGTTTAACCAGAAAAACCGTGGACAAGCACCACAACGTGTTTTTCCATCTCAGGATGTGCAAGAGAAGTTTCTTAGATCACAAGCTCCAGCAGCTCTGCAATTTAGTCATGGAAGCTCTTTGCTAGGACATACTGATGCTATAAGTGCAGCCATGCCAAATGTGCTTCCTGCTGTACAATTCCCTATTTCAGTCCAGAGCATTGCAAATAACTTTTCTCAATTACAGGGGGGGAACTTGATGTCTTTACTTCCTGGTGCTGGTCCTGCTATGTCACTAACAATACCTCATTCAAATGCTGGTCCTATTGTGTCAACCCAACAGCCAGGTGGTGCATTTTCTGGTTTAATTAACTCGCTTATGGCCCAAGGTTTGATATCAATGACTAATCAACCTCCCGAACAGGATTCTGTTGGAACTGAATTTAATCCAGATGTTCTAAAGATTCGTCATGAGTCTGCAATCAGTGCCTTATATGGTGATCTTCCGAGACAATGCTCTACTTGTGGCCTTCGATTTAAGTTCCAAGAGGAGCACGGTAGTCATATGGATTGGCATGTTACTAAGAATCGGATGTCTAAAAACCATAAGCAGAAGCCCTCTCGCAAGTGGTTTGTGAGTGAGAGTATGTGGCTTAGTGGCGCAGAGGCATTGGGAACAGAATCAGTCCCTGGTTTTTTGCCAAGTGAGATTTTAGAGGAAAAACAAGATGATGAAGAGTTGGCTGTGCCAGCTGATGAGGATCAGAATACATGTGCATTATGTGGCGAACCTTTCGATGAGTTTTACAGTGATGAAACTGAGGAATGGATGTACAGAGGAGCTGTATATATCAATGCACCAAAAGGAACAGTAGCAGGCATGGATAGGTCGCAGTTAGGTCCCATTGTTCATGCGAAGTGCAGATCTGAGTCTAGTGCGGTTCCATCTGAAGATAATGGACTGGATGAATGTAGGGCACCGATGAGGAGGAGATTCGACGAAAGCGAAGGCGGAGTTGACCAATATGGATCAGTTTTGTCACGTTTACTGTAA 2931 0.4371 MDPQNFLFSRENPRPLSFATASIVSSKPNIPNEIAQKPSPSILVGRFKALLKEREDEFRASSGDDVPVPPPSTEEIVQIYQLLLSDLTCNLKPIITDLTVIAELQVEHARGIADAICTRILEVPADQKLPSLYLLDSIVKNVGQGYIRYFSSCLPEIFCEAYRQVHPKLHNAMRHLFGTWSTVFPPSVLRKIEAQLQFSLAINSRSSTIDPLRVSESRQATHGIHINPKYLQQLEHSTMDSVGGEKLESTVNLGLANFGRGASKMHQPLSRRLGRSSPSEIGLDRPLSATIDECVVDNSAGMVAERDHLSHPASDYGVGKAGSRGEELSGWKQKHYSDDGRNLFQVSMSSSLSNGHQRQNLKALIDAYGSDKKETFNNKPLLVEHQDTNGLNKVVSTSWQNTEEEEFDWEDMSPTLVDHNRNNEFLPSRIGFSREKPVTNAATSERDPRRSWSSRSQLPPMDNSSVIAGDKLVYSSYGRGSPVQASGYQNQTNQSLSSRPPVDAWNVRGRVSNSQISPVSNIPNSDINLYGTQSALSRMGSALESTMEIRPTVLPASLGMRPAVNAHAVRPSTLNHTVPLDKHVKSQFEPIHSSSTIVNNGQNNSSFLDGVENKFTDLSKLHQLPTQLARRISFNQKNRGQAPQRVFPSQDVQEKFLRSQAPAALQFSHGSSLLGHTDAISAAMPNVLPAVQFPISVQSIANNFSQLQGGNLMSLLPGAGPAMSLTIPHSNAGPIVSTQQPGGAFSGLINSLMAQGLISMTNQPPEQDSVGTEFNPDVLKIRHESAISALYGDLPRQCSTCGLRFKFQEEHGSHMDWHVTKNRMSKNHKQKPSRKWFVSESMWLSGAEALGTESVPGFLPSEILEEKQDDEELAVPADEDQNTCALCGEPFDEFYSDETEEWMYRGAVYINAPKGTVAGMDRSQLGPIVHAKCRSESSAVPSEDNGLDECRAPMRRRFDESEGGVDQYGSVLSRLL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0359 976 MobiDBLite consensus disorder prediction 431 465 - -
Lele35g0359 976 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 67 944 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Lele35g0359 976 SUPERFAMILY ENTH/VHS domain 71 197 IPR008942 -
Lele35g0359 976 MobiDBLite consensus disorder prediction 484 501 - -
Lele35g0359 976 SMART 558neu5 75 197 IPR006569 -
Lele35g0359 976 ProSiteProfiles CID domain profile. 72 200 IPR006569 -
Lele35g0359 976 MobiDBLite consensus disorder prediction 484 503 - -
Lele35g0359 976 FunFam polyadenylation and cleavage factor homolog 4 69 197 - -
Lele35g0359 976 Gene3D - 70 198 IPR008942 -
Lele35g0359 976 CDD CID_Pcf11 80 197 - -
Lele35g0359 976 Pfam CID domain 92 191 IPR006569 -
Lele35g0359 976 ProSitePatterns Zinc finger C2H2 type domain signature. 798 818 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0359 Lele-ChrLele35 2156322 2162685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0359 736 939 C2H2 Transcription Factor Family AT4G04885 76.961 3.69e-106 347