Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0358 ATGTTTCAACAGCCAAACATGTTTGATTCTAATATGCTGGATATGTCCAACAAGATGTCGTCGGACAGTGATCTAATGGGAAGGAATACCAATGTGGACGATGATTACGAGACCAAATCGGTGACTGAAACAACCATGGAAGCTCCTTCCGGTGACGACCAAGACCCCGCCGACCAACGTCCCAAAAAGAAGCGCTATCACCGCCACACGCAGCGCCAAACACAAGAGTTGGAAGCCTTCTTCAAGGAGTGTCCCCACCCAGATGACAAACAAAGGAAAGAGCTGAGCCGTGAGCTGGGATTAGAACCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAAATGAAGGCACAACATGAACGGCATGAGAATTCTATATTGAAGTCTGAGAATGAAAAGCTTCGTGCTGAGAACAATAGGTACAAGGAAGCCCTAAGCAACGCGGCATGCCCCAACTGTGGAGGCCCTGCCACTCTTGGTGAAATGTCCTTTGACGAGCAGCATCTCAGGATTGAGAACGCTCGTTTAAGAGAAGAGATAGATAGGATATCAGGAATTGCGGCCAAATACGTTGGAAAGCCAGTGACATCCTTTTCGCACCTTTCATCTCATCATCATGTTCCTTCACGGTCGCTGGAAGATCTTGGAGTTGGTAGTAACTTTGTGTCACAGTCAGGGACGGTAGGGGAAATGTACAGTGTGAGTAACAGTGACCTTATTAGGTCACTGCCAGTGCCTTCTGAAGCTGATAAGCCCATGATTGTGGAGCTTGCTGTTGCAGCAATGGAGGAACTCATCAGATTGGCTCAGGCTGGAGAACCCTTGTGGATTATCTCTAGTGACCGCGAAGTTCTTAATGAAGAGGAATACTTGAGGACTTTTCCTAGGGGCATAGGTCCTAAACCCTTGGGATTAAGATCTGAAGCTTCAAGGGAATCAGCTGTCGTTATCATGAACCATATTAACCTTGTTGAGATTCTCATGGACGTGAATCAATGGTCAAGGGTGTTTTGCGGCATTGTCTCAAGAGCAATGACACTTGAAGTCCTGTCAACTGGAGTGGCGGGAAACTATAATGGAGCTTTGCAAGTGATGTCTGCTGAGTTCCAGGTGCCTTCACCTCTGGTTCCAACAAGAGAGAACTATTTTGTAAGGTACTGTAAACAGCATGCAGATGGGACATGGGCAGTGGTCGATGTTTCCTTAGACAACCTACGACCAAGTGCTTTATCTAAAAGCCGAAGAAGGCCTTCTGGCTGTCTCATCCAAGAATTGCCAAATGGTTACTCTAAGGTTACTTGGATAGAACATGTAGAAGTGGATGATAGAAATCTGCACAATATATACAGACCCCTAGTGAATTCTGGGCTTGCCTTTGGAGCTAAACGTTGGGTGGCCACACTAGATAGACAATGTGAACGTATTGCTAGTTCTATGGCCTGCAACATACCTGCAGGGGACCTTTGTGTGATAACAAGTTCAGAGGGAAGGAAGAGTATGCTGAAGCTAGCAGAGAGAATGGTGATGAGCTTCTGCGCTGGAGTTGGAGCTTCAACAGCACATGCATGGACGACACTATCAGCAACAGGGAATGATGATGTGAGGGTTATGACCAGAAAGAGTATGGATGATCCTGGCAGGCCTCCTGGTATTGTTCTCAGTGCTGCTACTTCTTTCTGCCTTCCTGTTCCTCCAAACAGGGTCTTCAATTTCCTCCGAGATGAGAACTCCAGAAGTGAGTGGGATATTCTATCCAATGGAGGTCTAGTACAAGAAATGGCTCACATAGCAAATGGCCGTGATCCAGGCAATTTTGTCTCTCTACTTCGTGTCAATAGCGCAAATTCAAGCCAAAGCAACATGGTGATACTTCAGGAGAGCTGCACAGACGCAACGGGGTCGTATGTGATTTATGCTCCTGTGGATATTGTGGCCATGAACACCGTGCTCGGAGGAGGAGATCCTGATTATGTTGCTCTCTTGCCTTCTGGTTTCGCCATTCTTCCCGACGGCTCCTCGCTGAACAACAACAATGGGGGAGGGAATATTCTTGATGTTGGATCTGGAGGAGGATCTCTTCTCACTGTTGCGTTTCAGATATTGGTTGATTCAGTGCCAACTGCTAAACTCTCTCTGGGCTCAGTCGCCACTGTTAACAGTTTGATTAAGTGCACTGTCGAAAGGATCAAAGCTGCTGTCATCTAA 2211 0.4686 MFQQPNMFDSNMLDMSNKMSSDSDLMGRNTNVDDDYETKSVTETTMEAPSGDDQDPADQRPKKKRYHRHTQRQTQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENSILKSENEKLRAENNRYKEALSNAACPNCGGPATLGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSFSHLSSHHHVPSRSLEDLGVGSNFVSQSGTVGEMYSVSNSDLIRSLPVPSEADKPMIVELAVAAMEELIRLAQAGEPLWIISSDREVLNEEEYLRTFPRGIGPKPLGLRSEASRESAVVIMNHINLVEILMDVNQWSRVFCGIVSRAMTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHADGTWAVVDVSLDNLRPSALSKSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRNLHNIYRPLVNSGLAFGAKRWVATLDRQCERIASSMACNIPAGDLCVITSSEGRKSMLKLAERMVMSFCAGVGASTAHAWTTLSATGNDDVRVMTRKSMDDPGRPPGIVLSAATSFCLPVPPNRVFNFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNFVSLLRVNSANSSQSNMVILQESCTDATGSYVIYAPVDIVAMNTVLGGGDPDYVALLPSGFAILPDGSSLNNNNGGGNILDVGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVI 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0358 736 MobiDBLite consensus disorder prediction 1 72 - -
Lele35g0358 736 CDD homeodomain 63 121 IPR001356 GO:0003677
Lele35g0358 736 Pfam Homeodomain 63 118 IPR001356 GO:0003677
Lele35g0358 736 SMART START_1 258 476 IPR002913 GO:0008289
Lele35g0358 736 Coils Coil 114 149 - -
Lele35g0358 736 SUPERFAMILY Bet v1-like 497 732 - -
Lele35g0358 736 MobiDBLite consensus disorder prediction 1 27 - -
Lele35g0358 736 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Lele35g0358 736 SMART HOX_1 61 124 IPR001356 GO:0003677
Lele35g0358 736 SUPERFAMILY Bet v1-like 251 478 - -
Lele35g0358 736 Gene3D - 49 136 - -
Lele35g0358 736 Gene3D - 321 481 IPR023393 -
Lele35g0358 736 CDD START_ArGLABRA2_like 253 475 - -
Lele35g0358 736 Pfam START domain 259 476 IPR002913 GO:0008289
Lele35g0358 736 ProSiteProfiles START domain profile. 249 479 IPR002913 GO:0008289
Lele35g0358 736 SUPERFAMILY Homeodomain-like 46 120 IPR009057 -
Lele35g0358 736 FunFam Homeobox-leucine zipper protein GLABRA 2 258 475 - -
Lele35g0358 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 59 735 IPR042160 -
Lele35g0358 736 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Lele35g0358 736 FunFam Homeobox-leucine zipper protein HDG1 50 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0358 Lele-ChrLele35 2146188 2149789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0358 4 735 Homeobox Transcription Factor Family AT4G04890 80.108 0.0 1192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele35g0358 START 3.6e-57 CL0209