Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0356 ATGGAATGCGGACGCCTTATCTCAATCCTGGTGCGTAGTAGGATATTAACGTTGTTACACCTTGCATGCATGAAAAACTTGAATATCTTTCTGGAAATAAATCGTGGAACGATGACATCATCTTCCAAAATCCGATCTTTCTTGCTCTTCTTCGCTCTCTGCTCTCTCGTTACCTTCAATGCTTCATCGGAATCTGCCGACAATGAAGTGCGCGAGCTTCTTGTCCTTCAATCCAGATCCACATCCACATCCGGTGTAATTCACCTCAATGATCAATCCATCTCTCGATTCCTCACTTACGTCGAAACCCCAAGACCCTACTGGATCATCGTCTTCTTCGACGCCTTTCTACTCCACAACAAACACGAGCTTCGCCTCAAAGATATTCTCCATGAATTCCAACTTGTCGCCTCCTCTTACATCAACAATCAAGACCCTTCTTCCCCCTCACATGCGAAATTGTTCTTCTGCAAATTGGAATACACAGAATCCAAATCGAGTTTCACTCTCTTCGGTGTCGATGCCCTTCCTCACCTTCGCATTGTTGCCCCTTATCATCAAAGCCTCAACGATTCATATCAGATTGATCAAGGAGACTGGTCCCGTCTCGCTGAATCCATGGCTGAATTCATCGAAACGAAGACCAACCTCGCGGTGGGTCCAATCCATCGACCCCCTATCATTTCTAGAAACAAATTGATACTGATCGGAATTGGATTCTTGATCTGGTTAACCTATTTCATGAAGAAGGTCATTGCGGGTCAAACAATTTTTCATGAACCCAAGTTTTGGCTAACTGGTGCTGTGTTCGTGTACTTTTTTAGCGTTTCAGGGGCAATGCACAACTTCATAAGGAAGGTGCCAATGTTTTTGGTGGATCGAAATGATAGATCTAAGTTTACAGTATTCTACAGGGGATCAGGAATGCAGCTAGGGCTTGAAGGTTTCTGTGTAGGGTTCTTTTATACAATTGTTGGTGTGTTATTGGGGTATGTAACACATGAACTGGTGAAGGTGAATAATGTGGCGACACAAAGGATGATTATGATCTTTGTGCTCTTGTTCTGTTTCTGGGCAGTGAGGTGGGTGGTGTTCTTGAGCAATTGGAAGTCTGGTTATGCTGTTCATGGATATTGGCCTTCAACTATTTCTTATCGGCTAAATCCATTTCCTCTGAACCTTAACAATACCATGAAAGCTGATGAACAGCAAACATATGCACGCCATTTTCAATCCTTTATGGGTTCTGCTTTTCAGTTGCGTATAAACACAGCAGGGTCGATTCCCCTGCCTTTGAGGCAACCAAATTACCCTTTTAGCCTCGGTCTCCATAGCAGCCGTCTTCTGCTCAACATCGCGAAGGTGACAAATTGGACATTTTGTGCTTCATCAATAGCAGTTGCTGAAAAGAAGAAAATGCAGAGAATAAAGAAGAAAATGGAGGAAGCGGCTGAAATGGTGGGAACGGCATTTGTGGATCATTACTACAACTTGTTTGATAATGATAGAGCTTCACTGTCTTCTCTCTACAGGGACAACTCTATGTTGACCTTCGAGGGACAGAAATTTGCTGGCGCCACTGATATCTCTTCCAAGCTCACCCAGCTGCCCTTGGATCAATGCCGCCACGTCATCAGCACCATCGACTGTCAGCCATCGTCGCCCACCGGAGGTGGCATTGTTGTCTTTGTCAGTGGCAGCCTCCAGTTGGCCGGAGAGGAGCATCATCTCAGGTTTAGTCAGGAAGCTTCTGCTAATGACATAAAGGCCAAGGATGGGAGTGGCAGGTTTAAGACTGTGAAGGAGGCTGTGGCTTCGGCACTTGATAACAGTAAGACGAGATATGTCATATATGTGAAGAAGGGAGTCCATAAAGAGAATGTTGAGATCGGATCCAAGAAGAAGAATTTGATACTGGTGGGTGATGGTAAAGATGCGACGATTATCACTGGAAGCTTGAATGCCGTCGATGGAACTCCCCACCTTCAGAACTGCCACCGTGGGTAA 2007 0.4504 MECGRLISILVRSRILTLLHLACMKNLNIFLEINRGTMTSSSKIRSFLLFFALCSLVTFNASSESADNEVRELLVLQSRSTSTSGVIHLNDQSISRFLTYVETPRPYWIIVFFDAFLLHNKHELRLKDILHEFQLVASSYINNQDPSSPSHAKLFFCKLEYTESKSSFTLFGVDALPHLRIVAPYHQSLNDSYQIDQGDWSRLAESMAEFIETKTNLAVGPIHRPPIISRNKLILIGIGFLIWLTYFMKKVIAGQTIFHEPKFWLTGAVFVYFFSVSGAMHNFIRKVPMFLVDRNDRSKFTVFYRGSGMQLGLEGFCVGFFYTIVGVLLGYVTHELVKVNNVATQRMIMIFVLLFCFWAVRWVVFLSNWKSGYAVHGYWPSTISYRLNPFPLNLNNTMKADEQQTYARHFQSFMGSAFQLRINTAGSIPLPLRQPNYPFSLGLHSSRLLLNIAKVTNWTFCASSIAVAEKKKMQRIKKKMEEAAEMVGTAFVDHYYNLFDNDRASLSSLYRDNSMLTFEGQKFAGATDISSKLTQLPLDQCRHVISTIDCQPSSPTGGGIVVFVSGSLQLAGEEHHLRFSQEASANDIKAKDGSGRFKTVKEAVASALDNSKTRYVIYVKKGVHKENVEIGSKKKNLILVGDGKDATIITGSLNAVDGTPHLQNCHRG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0356 668 Pfam Nuclear transport factor 2 (NTF2) domain 487 582 IPR002075 -
Lele35g0356 668 Pfam Pectinesterase 589 659 IPR000070 GO:0030599|GO:0042545
Lele35g0356 668 ProSiteProfiles Nuclear transport factor 2 domain profile. 487 581 IPR018222 -
Lele35g0356 668 FunFam Nuclear transport factor 2 480 591 - -
Lele35g0356 668 Gene3D Glutaredoxin 65 230 - -
Lele35g0356 668 CDD NTF2 484 581 IPR018222 -
Lele35g0356 668 Gene3D - 475 585 - -
Lele35g0356 668 SUPERFAMILY NTF2-like 485 581 IPR032710 -
Lele35g0356 668 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED 42 381 IPR021149 -
Lele35g0356 668 SUPERFAMILY Pectin lyase-like 590 661 IPR011050 -
Lele35g0356 668 Coils Coil 466 486 - -
Lele35g0356 668 Pfam OST3 / OST6 family, transporter family 76 373 IPR021149 -
Lele35g0356 668 Gene3D - 586 666 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0356 Lele-ChrLele35 2132208 2136360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0356 582 659 Carbohydrate Esterase AT1G11580 71.795 9.63e-29 119