Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0350 ATGGCTGCTTCCGAACATTCTTCCACTGATGAAGTCTTGGAGAACCTTCAAGAGGAAACCAGCAAAGAATCAAAGCCAGAATTTTCCAGCGATGAGGAATCATTGATTATCAGAATGTATAATCTAGTTGGTGAAAGGTGGGCTTTAATAGCTGGGAGGATCCCTGGAAGAACAGCTGAAGAGATCGAAAAGTACTGGACTGCTACATATTCAACAAGTGATTGA 225 0.4178 MAASEHSSTDEVLENLQEETSKESKPEFSSDEESLIIRMYNLVGERWALIAGRIPGRTAEEIEKYWTATYSTSD 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0350 74 SMART sant 24 72 IPR001005 -
Lele35g0350 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 26 71 - -
Lele35g0350 74 Pfam Myb-like DNA-binding domain 26 66 IPR001005 -
Lele35g0350 74 Gene3D - 27 69 - -
Lele35g0350 74 FunFam MYB-like transcription factor 27 69 - -
Lele35g0350 74 MobiDBLite consensus disorder prediction 11 31 - -
Lele35g0350 74 SUPERFAMILY Homeodomain-like 25 70 IPR009057 -
Lele35g0350 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Lele35g0350 74 CDD SANT 27 66 IPR001005 -
Lele35g0350 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Lele35g0350 74 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0350 Lele-ChrLele35 2117027 2117552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0350 29 68 MYB Transcription Factor Family AT5G35550 65.000 2.44e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele35g0350 Myb_DNA-binding 1.7e-08 CL0123