Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0339 ATGAAGCTCTTCAAGATTGATCCTCCTCTCTCTGTTCTCATGATCTTCATCTCGATCATTGCAGTGATAATAACCAGTCCTAGAGCATCAGCCCAAACTGAGGAATATCATTTCTGTCAAAACACCACATTTTTCTCTTCCAATACTGCCTATCAAACCAATCTCAACCATCTCCTTTCCTCGCTTTCCACAAATTCCACCAGCCAAAACGGTTTCTACCATGCCACCGCCGGCAACTCCAACGACACTGTCTACGGCGCCTTCCTCTGCCGCGGAGATCTCAACCCCGATGCCTGCCATGACTGCGCTTCCACAGCAGCCAAACAAATACTCCAAAAGTGTCCGTTCGACAAAAAGTCGGTTCTCTGGTTCAATGAGTGTATGTTGCGTTACTCAGACGAGCCTTTCATCTCCACCAGTGAAGAAACGCCCAGGCTTGTTTTGGTGAATACTGCGACGAGCTCAAACCAGAGTAGCTTTATGTTGCTGTTGGCCGAGACTATCAACGCGGCGGCGGCGCAGGCGGTGAAGGGCGGAGCCGACAAGAAGTTTGGTACCAAAGAAGCCAAATTTTCTAGTTTTCAAACGCTGTACACGCTTGCACAGTGCACGCCGGACTTATCAGAAACTACCTGCGACACATGCTTGAAACGAGCAATTTCCAACTTACCCAGTTGCTGCAATGGAAAGATTGGGGCCAGAGTCCTACAAAGTAGTTGTATTGTCCGATATGAAACGTACCCATTTTACAATTCATCGTCGGTGATTGCCTCACCAGAACCAACGCCAAAAGGAAAAACCCGGATCTCTGTAGCCATAATCGTTGCGATTGTGGCTCCAATTGTGACTGTGTTGCTGCTTCTCTTCTTTCTCTGCTGGTTATTAATTGGAAGGGCAAGCAACAAGAAGCACATATCAGTGCCAACTGAAGAAAATGATGTTGAAATTTCCGGCGTGGAGTACTTGCAGTTTGATCTGGAAACGGTCAAATTGGCCACAAACAACTTCTGCCATGACAATAAATTAGGCGAAGGAGGATTTGGTGAGGTTTTCAAGGGATCTCTTCCTAATGGGCAAGCTATTGCAGTGAAGAGGCTTTCATTAAGCTCTACGCAAGGGGTAGAAGAATTCAAGAATGAGGTGGTTTTAATGGCCAAGCTTCAACATAGAAACCTTGTTAGACTATTGGGATTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATCCCCAACATGAGCTTGGACCATTTTCTTTTCAACGATGAAAGAAAAAGCATGCTGAGTTGGCCAAAACGGTACAAGATTATACAAGGAGTTGCTCGAGGAATACTTTATCTTCATGAAGACTCTCGCCTTAGAATCATACACCGTGATCTTAAAGCTAGTAATATATTATTAGATGAAGATTTCAATCCAAAAATTGCAGATTTCGGTATGGCAAAAATTTTTTATGCTGATCAAACTCAAGGAAATACAAGTAGAATCGTTGGAACATTTGGTTACATGCCTCCAGAATATGCAATGCATGGACATTTATCTGTAAAAGTGGATGTATATAGTTTTGGTGTGTTGATTTTGGAAATAATCAGCGGACAAAAGAGTACATCCTTTCAAGAATCCAACTATGATGAACATCTCTTGAACTCTGCATGGAGAAAATGGAAAGATGGGAGGCCATTGGAAGTGTTAGACGTGAGTTTGAGAGATTTTTGTGATAGAGAGGAAGTGAACAGATGCATTCAGATTGCATTATCATGTGTACAAGAAGATCCAGATCGAAGGCCAACAGTGCAAACAATAGTTCTGACGCTCAACAGTTACTCAGTTAGTGTAGCAATACCTGAGAGGCCTCCAATGTTGGTTCAAAGCAGAACTGTGGTTGAGCCCTGCAGCCTTCCATTGGAATCATCAAATAAGTCTTCTAAAAGCAAATCATCAGTCGCATACTCTATTAATGAAGCTTCCATCACTCAAGTGTACCCTCGCTAG 1998 0.4334 MKLFKIDPPLSVLMIFISIIAVIITSPRASAQTEEYHFCQNTTFFSSNTAYQTNLNHLLSSLSTNSTSQNGFYHATAGNSNDTVYGAFLCRGDLNPDACHDCASTAAKQILQKCPFDKKSVLWFNECMLRYSDEPFISTSEETPRLVLVNTATSSNQSSFMLLLAETINAAAAQAVKGGADKKFGTKEAKFSSFQTLYTLAQCTPDLSETTCDTCLKRAISNLPSCCNGKIGARVLQSSCIVRYETYPFYNSSSVIASPEPTPKGKTRISVAIIVAIVAPIVTVLLLLFFLCWLLIGRASNKKHISVPTEENDVEISGVEYLQFDLETVKLATNNFCHDNKLGEGGFGEVFKGSLPNGQAIAVKRLSLSSTQGVEEFKNEVVLMAKLQHRNLVRLLGFCLDGEEKILIYEFIPNMSLDHFLFNDERKSMLSWPKRYKIIQGVARGILYLHEDSRLRIIHRDLKASNILLDEDFNPKIADFGMAKIFYADQTQGNTSRIVGTFGYMPPEYAMHGHLSVKVDVYSFGVLILEIISGQKSTSFQESNYDEHLLNSAWRKWKDGRPLEVLDVSLRDFCDREEVNRCIQIALSCVQEDPDRRPTVQTIVLTLNSYSVSVAIPERPPMLVQSRTVVEPCSLPLESSNKSSKSKSSVAYSINEASITQVYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0339 665 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Lele35g0339 665 ProSiteProfiles Protein kinase domain profile. 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0339 665 FunFam cysteine-rich receptor-like protein kinase 10 412 614 - -
Lele35g0339 665 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Lele35g0339 665 Pfam Protein tyrosine and serine/threonine kinase 339 606 IPR001245 GO:0004672|GO:0006468
Lele35g0339 665 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Lele35g0339 665 CDD STKc_IRAK 342 608 - -
Lele35g0339 665 Pfam Salt stress response/antifungal 155 247 IPR002902 -
Lele35g0339 665 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Lele35g0339 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 136 - -
Lele35g0339 665 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Lele35g0339 665 FunFam Cysteine-rich receptor-like protein kinase 25 144 249 - -
Lele35g0339 665 FunFam Cysteine-rich receptor-like protein kinase 10 298 411 - -
Lele35g0339 665 SMART serkin_6 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0339 665 Gene3D Transferase(Phosphotransferase) domain 1 412 616 - -
Lele35g0339 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 661 - -
Lele35g0339 665 SUPERFAMILY Protein kinase-like (PK-like) 321 631 IPR011009 -
Lele35g0339 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Lele35g0339 665 Gene3D - 145 249 IPR038408 -
Lele35g0339 665 Gene3D - 32 136 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0339 Lele-ChrLele35 2043824 2046475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0339 10 665 Receptor kinase-like Gene Family AT4G05200 48.892 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele35g0339 PK_Tyr_Ser-Thr 1.1e-48 CL0016