Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0338 ATGTTGATAATTAACATGACTTCCCACAAAATTATCTTACTCTTTTTCTTTATTAGCTTTCTCTGTTGTGCTACTACCCAAGCACAACCTACTTATAGTAATAGCAGTTGTTCTTCCGACACCTTCGTTGCCAATGGTTCCTTCCAATCCAACCTCACCAACCTCCTCTCTTCCTTAGCTTCCAATAACACTGCCAACACGGACTTCTACAACACCACCGTCCGCGGTGGCAACAATACCGTATACGGCCTCTTCATGTGCCGGGGTGACGTCAACCTCACGCTGTGCCACCAGTGCGTCCGTGTCGCAACCGATGATATCCGTTCCCGGTGCAACACCTCGAAGGAGGCCGTGATCTGGTACGAGGAGTGCATGGTTCGTTATTCCGACCGCTACTTCTTTTCCACCGTCGACACGAGCGCTAGTGGGTGTGGGGCCAACTCCGTCAGCGTCGCCAACAACCAAACAGGATTCATGAATTTGTTGTCGGCAACTATGAACAAGGCCGCGGATGAGGCGGCGAGACCTGCTTTGGGGCAAAAGAAGTTTGCAACAGAAGAAGCGAGTTTACAGTTTCAAACTATGTATTGTCTGGTTCAGTGCACGCCGGACCTTTCGCCCCAAGGTTGCAGAACATGTCTGAGTGATGCGATTGGGGAGCTTTCCAACTGTAGTGACAGGAGCATAGGAGGAAGAGTTCTATATCCCAGTTGTAACGTTCGTTATGAGTTGTTCGTCTTCTATAATTCTAGTGGTACGCCGCCGCCTGCTCCTCCACTTCTTCCGGTAACAAATTCTTCAGGAAATGCAAAGACCATTGTGATAGTTGTGGTTTCTGTTGGTGGTGCGGGGATACTTTTTTGTCTGGCGTACTATCTCTTAATGAGTTTAATAAAGAAGAGACGCAGGGCTGTTCTCAGGCAAAAATACTTTGGAGATGAAGGCAACACTTTAGAGCGTCTGCAATTCAGTTTGGCTACTATTGAAGCTGCAACAAATAGGTTTTCGCAGGAAAATTGCTTAGGCCAAGGTGGATTTGGACAGGTTTACAAGGGTAATCTTTCAAATGGTCAAGAAATTGCTGTAAAGAGACTTTCAAAAGGTTCAGGCCAAGGTGCAAAAGAATTTATAAATGAAGTTTTATTAATAGCCAGACTCCAGCACAGAAATTTGGTGGCCTTATTAGGATTTTGCATAGAGGAGCAGGAGAAAATTCTTATTTACGAATATGTTCCTAACAAAAGCCTCGATTACTTTCTATTTGGTTCCGAGAAAAATAGAAGATTGACTTGGGAGGAGTGTTATGAAATCATAAGAGGAGTTGCTCGAGGAATTTTGTATCTTCATGAATATTCTCGCCTTAAAATTATACATCGTGATCTCAAACCTAGTAATATTTTATTAGATAATGAAATGAATCCAAAAATTTCAGATTTTGGCTTAGCTAAGATGGTTGCTATAAATGAAAACGAGGGAAATACAAGGAGAATTGTTGGAACATATGGTTATATGCCTCCAGAATATGCAATGTTCGGATTATATTCTGAAAAATCAGATATTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGCGGAAAGAAAAATGCAAGTTGTCATGATGACTCCCAGTATGCCGATAGCCTCTTGAGCTATACGTGGAATCAATGGAATAACGAGAAGTTGGTAGAGATGTTGGATTCAAATCTAAAAGAAATGGAATCGTACAATGAAGTGATGAGGTGCATCCAAATAGGGTTGTTATGCGTTCAAAAGCATCCAGATGCAAGACCTTCCATGGCGACAGTGGTTTCATATCTGAGCAATGATTCAGTTGAATTGCCAGATCCACAGCAACCTGCATTCTTTTTGCATGCTCGAAGAAGGGGAATTACTTCTGCAAGTAAAGAATATAGCTCTATCAATGAAATGTCTATCAGTGATTTCTTTCCTCGCTAG 1959 0.4222 MLIINMTSHKIILLFFFISFLCCATTQAQPTYSNSSCSSDTFVANGSFQSNLTNLLSSLASNNTANTDFYNTTVRGGNNTVYGLFMCRGDVNLTLCHQCVRVATDDIRSRCNTSKEAVIWYEECMVRYSDRYFFSTVDTSASGCGANSVSVANNQTGFMNLLSATMNKAADEAARPALGQKKFATEEASLQFQTMYCLVQCTPDLSPQGCRTCLSDAIGELSNCSDRSIGGRVLYPSCNVRYELFVFYNSSGTPPPAPPLLPVTNSSGNAKTIVIVVVSVGGAGILFCLAYYLLMSLIKKRRRAVLRQKYFGDEGNTLERLQFSLATIEAATNRFSQENCLGQGGFGQVYKGNLSNGQEIAVKRLSKGSGQGAKEFINEVLLIARLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDYFLFGSEKNRRLTWEECYEIIRGVARGILYLHEYSRLKIIHRDLKPSNILLDNEMNPKISDFGLAKMVAINENEGNTRRIVGTYGYMPPEYAMFGLYSEKSDIFSFGVIVLEIISGKKNASCHDDSQYADSLLSYTWNQWNNEKLVEMLDSNLKEMESYNEVMRCIQIGLLCVQKHPDARPSMATVVSYLSNDSVELPDPQQPAFFLHARRRGITSASKEYSSINEMSISDFFPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0338 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 30 132 - -
Lele35g0338 652 SUPERFAMILY Protein kinase-like (PK-like) 319 638 IPR011009 -
Lele35g0338 652 Gene3D Phosphorylase Kinase; domain 1 298 410 - -
Lele35g0338 652 Pfam Protein tyrosine and serine/threonine kinase 338 607 IPR001245 GO:0004672|GO:0006468
Lele35g0338 652 ProSiteProfiles Gnk2-homologous domain profile. 139 247 IPR002902 -
Lele35g0338 652 FunFam Cysteine-rich receptor-like protein kinase 25 142 247 - -
Lele35g0338 652 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0338 652 SMART serkin_6 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0338 652 CDD STKc_IRAK 341 607 - -
Lele35g0338 652 FunFam cysteine-rich receptor-like protein kinase 10 411 614 - -
Lele35g0338 652 Pfam Salt stress response/antifungal 152 243 IPR002902 -
Lele35g0338 652 Pfam Salt stress response/antifungal 37 130 IPR002902 -
Lele35g0338 652 Gene3D Transferase(Phosphotransferase) domain 1 411 616 - -
Lele35g0338 652 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Lele35g0338 652 Gene3D - 29 133 IPR038408 -
Lele35g0338 652 Gene3D - 139 247 IPR038408 -
Lele35g0338 652 FunFam Cysteine-rich receptor-like protein kinase 10 298 410 - -
Lele35g0338 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Lele35g0338 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 647 - -
Lele35g0338 652 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0338 Lele-ChrLele35 2038311 2040953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0338 12 652 Receptor kinase-like Gene Family AT4G05200 44.214 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele35g0338 PK_Tyr_Ser-Thr 2.5e-49 CL0016