Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0333 ATGACCCATGGGAGTGGAGAGGTTCCGCTCCCCCTCATCTCCAACACGGCTAACTCATCCTTCACCCTCACCATGACGTCCATGGTCATGGCTTCCCAAAAAATTTCCTTACTCTTCTTCTTTATTACCTTCTTGTATTCTGCTGTTACTGTAGCTCAGCCTTATTATCTTTACCACAATTGCTCTTCCAACAAAACCTTCGCCGCAGCTAGTGCCTTCGAATTGGACCGCGCTTCACTCCTATATTCCTTAACTTCCGCCAACACCGACTTCTACAAGAACACCTTTGCCCGTGGCGGCGACACCGTCTATGGCCTCTTCATGTGCCAGGGTGACGTCAACCTCTCGATCTGCCACCAATGCGTCCTTAACGCATCCCAACGTTTATCTTTCGAGTGCAGCGTTTCGAAGGAGGCCATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCATTCCTTCTTCTCTACCGTCGACACAAGGCCTAGACTCGGCCTCTTGAACACCGGAAACGTCTCAAACCAGGCAAGCTTCATGAGAACATTGTACGATACTATGAACAAGACCGCAGATGAGGCGGCTAAACCTGCTGTGGGGAAAAAGAAGTATAAGACCGGAACTGCGAATTTTTCAGATTTTCAAACTGTGTATACTCTTGCTCAGTGCACGCCGGACCTTTCCCCGTCAGATTGCAGAAGGTGCTTGAGTGGTGCGATTGGGGACCTTGATTGGTGTTGTGATGGCAAGCAAGGAGGCAGAGTTCTATATCCCAGTTGCAACATTCGCTATGAGTTATATCCTTTCTATTACTTTGATGATCAGCCAGAAGCGATGGTGGCTCCACCGCCTCCACACCTCTCTCCTCCAACAAATTATTCAGATCATCCTCAAGTAAAAAGGAATAGTCCGTCAACGAGGACTATTGTGATAGTTGTGGTTTCTTCTGTTGCTGGTTTAGTTATATTTTCTTGTCTGGCCTCCTATCTCTTAAAGAGTCTAATAAAGAAGAGACGCAATGCTGTTCTCAGACAAAAATACTTTGGAAACGAAAGCAACAATTTAGAGCCTCTGCAATTTAGTTTGGCCACCATTGAAGCTGCAACAAATAAGTTTTCACATGAAAACTGTTTAGGCCGAGGTGGATTTGGAAGAGTTTACAAGGGTATTCTTTCAAATGGTCAAGAAATAGCTGTCAAGAGACTTTTAAAAAGTTCTGGTCAAGGTGCAGAAGAATTCAAGAACGAGGTTTTATTAATTGCCAAACTCCAGCACAGAAATTTGGTAGCCTTGCTTGGATTTTGCATAGAAGAACAGGAGAAAATTCTTATTTATGAATATGTTCAGAACAAAAGCCTTGACTACTTTCTATTTGGTTCGAGAAAAGGCACATTATTAAATTGGGTAGAGCGCTGTAAAATCATCGGAGGAGTTGCTCGAGGAATTCTCTATCTCCATGACTATTCTCGCCTTAAAGTTATACATCGTGACCTAAAACCAAGCAATATTTTATTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGTTTAGCTAAGATGGTTGCTATCAACACAAATGAGGGAAGTACAAATAGAATAGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGTATGGACAATATTCTGAAAAATCGGATGTTTTTAGTTTTGGAGTTATTGTTTTAGAAATTATTAGCGGAAAGAAGAATACAAGTCGAGATAGTCAATCACAATACGTTGATGGCCTATTGAGCTATGCTTGGAAGCAATGGAAGGAGGAGAAGTTGCTAGAGATATTAGATTCAAATATAAAGGAATTTGGATCATATAATGAAGTGATCAAGTGCATCCACATTGGCCTGTTGTGTGTTCAAGAAAATCCAGAGAAAAGGCCGACAATGGCTGAGGTTGTTTCATATCTGAGTAATAATACCATTCAACTGCCATTTCCCCAGGAACCTGCTTTCTGTCTGCACGGTGGGATGGTGCCTAGTAGTAGTACAAGTGGAAGTAAGGAATCAGGCTCCACGGTTGAAGTGTCTATGAGTGAATTCTTTCCTCGTTAG 2076 0.4229 MTHGSGEVPLPLISNTANSSFTLTMTSMVMASQKISLLFFFITFLYSAVTVAQPYYLYHNCSSNKTFAAASAFELDRASLLYSLTSANTDFYKNTFARGGDTVYGLFMCQGDVNLSICHQCVLNASQRLSFECSVSKEAIIWYDECLLRYSNHSFFSTVDTRPRLGLLNTGNVSNQASFMRTLYDTMNKTADEAAKPAVGKKKYKTGTANFSDFQTVYTLAQCTPDLSPSDCRRCLSGAIGDLDWCCDGKQGGRVLYPSCNIRYELYPFYYFDDQPEAMVAPPPPHLSPPTNYSDHPQVKRNSPSTRTIVIVVVSSVAGLVIFSCLASYLLKSLIKKRRNAVLRQKYFGNESNNLEPLQFSLATIEAATNKFSHENCLGRGGFGRVYKGILSNGQEIAVKRLLKSSGQGAEEFKNEVLLIAKLQHRNLVALLGFCIEEQEKILIYEYVQNKSLDYFLFGSRKGTLLNWVERCKIIGGVARGILYLHDYSRLKVIHRDLKPSNILLDDEMNPKISDFGLAKMVAINTNEGSTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIVLEIISGKKNTSRDSQSQYVDGLLSYAWKQWKEEKLLEILDSNIKEFGSYNEVIKCIHIGLLCVQENPEKRPTMAEVVSYLSNNTIQLPFPQEPAFCLHGGMVPSSSTSGSKESGSTVEVSMSEFFPR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0333 691 ProSiteProfiles Gnk2-homologous domain profile. 161 269 IPR002902 -
Lele35g0333 691 Pfam Salt stress response/antifungal 61 152 IPR002902 -
Lele35g0333 691 Pfam Salt stress response/antifungal 172 267 IPR002902 -
Lele35g0333 691 Gene3D Phosphorylase Kinase; domain 1 333 447 - -
Lele35g0333 691 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 677 - -
Lele35g0333 691 SMART serkin_6 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0333 691 SUPERFAMILY Protein kinase-like (PK-like) 355 668 IPR011009 -
Lele35g0333 691 Gene3D - 164 269 IPR038408 -
Lele35g0333 691 Gene3D - 54 155 IPR038408 -
Lele35g0333 691 MobiDBLite consensus disorder prediction 669 691 - -
Lele35g0333 691 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 335 447 - -
Lele35g0333 691 FunFam Cysteine-rich receptor-like protein kinase 25 163 269 - -
Lele35g0333 691 MobiDBLite consensus disorder prediction 669 684 - -
Lele35g0333 691 CDD STKc_IRAK 378 644 - -
Lele35g0333 691 Gene3D Transferase(Phosphotransferase) domain 1 448 651 - -
Lele35g0333 691 Pfam Protein kinase domain 374 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0333 691 ProSiteProfiles Protein kinase domain profile. 372 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0333 691 ProSiteProfiles Gnk2-homologous domain profile. 55 155 IPR002902 -
Lele35g0333 691 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Lele35g0333 691 FunFam cysteine-rich receptor-like protein kinase 10 448 651 - -
Lele35g0333 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0333 Lele-ChrLele35 1998373 2001467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0333 35 686 Receptor kinase-like Gene Family AT4G05200 45.127 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele35g0333 Pkinase 2.9e-50 CL0016