Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0325 ATGTCGTTCTCCAAATTATCTGCAACATCCTTCATGCTTCTCGCTCTGTTTCCATTTCTGAGTTTCACCAGCGAAGCATCTCCTACTTTCAGCTCTAAGGCCTGCACAGACTCAGCCACTTACAAACCCAACAGCACATTTGAAGCCAATTTGAACGTTCTTCTCTCTGTTCTTACCTCCAACGCCTCCCTCCACGACGGTTTCTACCGTACCACCTTGGCTCAGGGAACTTCCGCCGTCGTCAACGGCCTTTTTCTCTGCCGCGGTGATGCCACCCCCACCCTCTGCCAAGATTGCGTCGCCGATGCCGCCAAAGAGATAAGACGCCAGTGTCCAAACCAAACGGAGTCTATCGTCTGGTACGATGTTTGTATGCTTCGCTACTCCAACAACACCTTCAACAATATCGTCCCTTCCACGGACTTGTCGGATAACAGCAGTATAGCTAGCGCCGAACAGGATCAGTTCAATCAATTGTTGTCGAACATGTTGCAAAATTTGGCGGCCGAAGCTCAAAATTCCCAGACGGGGAAGAAATTCGCTGCAGGACAAGTGAACCTAACATCGTCACAAACGTTGTACGGCCTTGTACAGTGTTACCCTGATCTGTCTCCTTTTGATTGCAACATGTGTCTCCAAAGCGCCATTGGAGGACTGCCAAATTGTTGTAGCAACAAGAAGGGGGCAAGTTCTCTGCTTCCAGCATGTAACATAAGATATGAACTTTACCCATTTTACAACACAACCCTGACATCCTCTGCACCACCAGTTCATCCTCGAGCAGGAAAAAGCAACATCGCCATAATTGTTGCGATTACTGTGCCGATTGTTGTTTCTGTGGTACTTTTTGTTGCGGCTTGTTGTTTCCTGCGTAAGAGGGCTAGCAAGAAAAAGAAGTATAATTCGTTCAGACAGGATGACGTTGGGAATGATCTTACTGACGTAGAGTCTCTGCAATTTGACTTGGCGACAATAGAAGCTGCCACAAAAAGGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGCAGTTTATAAGGGTATCCTCCCAAACGGACAGGAGATTGCTGTGAAGAGGTTGTCGGTAACGTCATTGCAGGGTGCTTTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACACAGGAATTTAGTGAGGCTATTGGGATTTTGCTTGGAAGGGCAAGAGAAGATACTTGTTTATGAATACATCCCAAACAAAAGCCTTGATCACTTCCTATTTGATTATGAGAAGAAAACAATGCTTGATTGGTCAAGGCGTTACAAGATCATAATGGGGATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCAACTAAGAATAATACATCGTGATCTCAAAGCAAGCAATGTTTTATTAGATGCCAATATGAACCCAAAAATCTCAGATTTTGGCATGGCAAAAATCTTTCATGGAGAACAAACTCAAGTGAACACTGGAAGAATAGTTGGAACTTATGGTTATATGTCTCCAGAGTATGCAATGCGCGGTCAATTTTCTGTGAAATCAGATGTGTTTAGCTTTGGTATATTAGTTTTGGAGATTGTAACCGGCAAGAAGAACACCGATGTTTATCAATCACATCAAGCAGATGACCTCTTAAGCTATGCCTGGGATAACTGGACACAGAAAACACCATTGGAGTTGTTGGATCCAACACTGAGAGCCGGCAGCTTTCATGCGCAGAACACCGAACAGGCAAAATAA 1743 0.4452 MSFSKLSATSFMLLALFPFLSFTSEASPTFSSKACTDSATYKPNSTFEANLNVLLSVLTSNASLHDGFYRTTLAQGTSAVVNGLFLCRGDATPTLCQDCVADAAKEIRRQCPNQTESIVWYDVCMLRYSNNTFNNIVPSTDLSDNSSIASAEQDQFNQLLSNMLQNLAAEAQNSQTGKKFAAGQVNLTSSQTLYGLVQCYPDLSPFDCNMCLQSAIGGLPNCCSNKKGASSLLPACNIRYELYPFYNTTLTSSAPPVHPRAGKSNIAIIVAITVPIVVSVVLFVAACCFLRKRASKKKKYNSFRQDDVGNDLTDVESLQFDLATIEAATKRFSDENKIGQGGFGAVYKGILPNGQEIAVKRLSVTSLQGALEFKNEAALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDHFLFDYEKKTMLDWSRRYKIIMGIARGILYLHEDSQLRIIHRDLKASNVLLDANMNPKISDFGMAKIFHGEQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGILVLEIVTGKKNTDVYQSHQADDLLSYAWDNWTQKTPLELLDPTLRAGSFHAQNTEQAK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0325 580 SUPERFAMILY Protein kinase-like (PK-like) 316 568 IPR011009 -
Lele35g0325 580 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 407 - -
Lele35g0325 580 Gene3D Phosphorylase Kinase; domain 1 291 407 - -
Lele35g0325 580 SMART serkin_6 332 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0325 580 CDD STKc_IRAK 338 568 - -
Lele35g0325 580 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Lele35g0325 580 FunFam cysteine-rich receptor-like protein kinase 10 408 578 - -
Lele35g0325 580 ProSiteProfiles Protein kinase domain profile. 332 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0325 580 Gene3D - 141 245 IPR038408 -
Lele35g0325 580 Gene3D - 28 133 IPR038408 -
Lele35g0325 580 Pfam Protein tyrosine and serine/threonine kinase 335 547 IPR001245 GO:0004672|GO:0006468
Lele35g0325 580 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Lele35g0325 580 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Lele35g0325 580 Gene3D Transferase(Phosphotransferase) domain 1 408 579 - -
Lele35g0325 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Lele35g0325 580 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Lele35g0325 580 Pfam Salt stress response/antifungal 151 243 IPR002902 -
Lele35g0325 580 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Lele35g0325 580 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 572 - -
Lele35g0325 580 FunFam Cysteine-rich receptor-like protein kinase 10 139 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0325 Lele-ChrLele35 1951528 1954104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0325 9 572 Receptor kinase-like Gene Family AT4G05200 49.231 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele35g0325 PK_Tyr_Ser-Thr 1.7e-46 CL0016