Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0286 ATGGCTTTAGAGGCTCTGAATTCTCCCACTACTGCCCCGGCTGCTTTCACCTTCAAGCACGAGGAAGAAGAAGATGATGAGCTTGATCTTCACTGGGCTAAGGGCAAGCGTTCCAAGCGACCTCGTTTCGACGCCGACAACCCTCCTTCTGAGGAAGAGTACCTCGCTCTCTGTCTCATCATGCTCGCTCAAAGCGGCCACAACAACGCCGCCTCCGCCTCGGCCACCGCCTCTCCGCTGCGCCCTTCATCCTCATCGTCGCCTCCTAATAATCCTGTGAAGCCGTCTCATAGGTGTACCGTCTGTAATAAAGTCTTCTCTTCTTACCAAGCGCTCGGTGGCCACAAGGCCAGCCACCGTAAGTCCTCCTCCGAATCCACCGCCAACGCTTCTGCCGTCGCCGCTGCCGACAACGTCTCCACTTCCTCTGCTACCGGCACGGGAAGGATGCATGAGTGTTCCATCTGTCACAAGGTCTTCCCTTCCGGTCAGGCCTTGGGTGGACACAAGAGATGTCACTACGATGGCGGCAACGCGAACAGCAGTAGCGCCGGAGCCGGCGTTTCCTCATCAGAGGGAGGTGGCGCTTCTACTGTAAGCCTCCGCGGGTTCGACTTAAACCTGCCGGCTCCGCTGATGGACTTATCCCCGGCAGGATTTGGCTCCAGCTCCGATTCCGGGATGAAGAAGATCGGCGTAGAGCAAGAGGTGGAAAGTCCGTTACCGGGGGGAGCCGGTAATAAGAGAAGTCGTGTGCTTTTTACCGGCGAAGAAGACGATGTAAAGCCTTCGTGGTTACAGAATTGA 807 0.5688 MALEALNSPTTAPAAFTFKHEEEEDDELDLHWAKGKRSKRPRFDADNPPSEEEYLALCLIMLAQSGHNNAASASATASPLRPSSSSSPPNNPVKPSHRCTVCNKVFSSYQALGGHKASHRKSSSESTANASAVAAADNVSTSSATGTGRMHECSICHKVFPSGQALGGHKRCHYDGGNANSSSAGAGVSSSEGGGASTVSLRGFDLNLPAPLMDLSPAGFGSSSDSGMKKIGVEQEVESPLPGGAGNKRSRVLFTGEEDDVKPSWLQN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0286 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 173 IPR013087 -
Lele35g0286 268 MobiDBLite consensus disorder prediction 217 268 - -
Lele35g0286 268 Pfam C2H2-type zinc finger 97 121 - -
Lele35g0286 268 Pfam C2H2-type zinc finger 151 175 - -
Lele35g0286 268 MobiDBLite consensus disorder prediction 116 144 - -
Lele35g0286 268 SMART c2h2final6 151 173 IPR013087 -
Lele35g0286 268 SMART c2h2final6 97 119 IPR013087 -
Lele35g0286 268 MobiDBLite consensus disorder prediction 72 96 - -
Lele35g0286 268 MobiDBLite consensus disorder prediction 17 48 - -
Lele35g0286 268 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Lele35g0286 268 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 37 210 IPR044653 GO:0003700
Lele35g0286 268 SUPERFAMILY beta-beta-alpha zinc fingers 97 173 IPR036236 -
Lele35g0286 268 Gene3D Classic Zinc Finger 95 173 - -
Lele35g0286 268 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Lele35g0286 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Lele35g0286 268 MobiDBLite consensus disorder prediction 123 144 - -
Lele35g0286 268 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0286 Lele-ChrLele35 1739422 1740228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0286 1 216 C2H2 Transcription Factor Family AT5G67450 42.857 4.14e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele35g0286 zf-C2H2_6 6e-13 CL0361