Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0272 ATGGAGGCCCCCTCAGATCAAATGAATAGCAAAACTGGGGAGCTAATGCACCATAATAACAACACCTCAGACCAGCTGCATACAATTGATTCGGGAATTACACATTCTGAATTGCCAGAAAAACCTAATGAGATTGGTTCTGAGTCTTTGGATGATGAACAAAGGGTTATTGGAACTAGGGAAACCACCTTTCTTCTTGATGAAAAATCACCTTCAGATGGCGTGACTGGGAATTCTGCCATTCAACTTCCTTCACAACCTCCATGTGACTTAGACAAAAGCTGTCAAACTGAAGAAGGTTCAGGTTTTCAACATAAGACTTTTGAACTGGGCAATTCTATTGGCATGGATGCTTCCTCAGAGAACTTGAGTAGCAAAACTAGAAAGTCTTTGTGCCATATCCATAATACCTCAGAACAGTTGCATACACTTGATCCCAGAACTGCTCTTTTTAAAACGTCTGAGAAAACTAATCAGACTGGCTCCAAATTGTTGAACAATGAACAAAGGGTCCTAGGTAGTGAGGAAACCAGCTCTCTTCTTGATGAAAAACAACTTACAGTTTCTGACAGTATGATTGGAGATTCTGTCATTCAATTGCCAACACAATCTCAGTGCGACTTAGACAATAGTTGCCAGAATGGAGGGGGTTCATGCTTTCAACACAATACCTTAAAACAGGTTTCTGGTTTTTTATCTAATGATCAATCTCAGAACAAACGTCAGCAGGTCTCCAAAAATGAAAATAATGAACCTGTGGAAAGAAGTGGTGCAATTGAACAATTAGATCTACCTTCTCAAGAAACTCCCAGGGGCAGTAGTCCAAACTCTTTGCAAAGAAACTCCAAAAGGGCAACTCGAGCCCGGTTAGGGTGCAAGGATAAAAGAACTACAACATCATTGAAGAAAAAATATATTCTAAGAAGTAGTGACAGAGTTTTGCGATCAAGGGTGCGTGAAAAACCTAAACCATCCCAATCAAACACTAATTTGGTTAATGGGGATCACGTTGGAGAAAATAGAAGAAAAGGCAGGAAGAAGAATAAGGGTAGAGGGAGGATAGTGACTGATGAATATTCAAGGATCAGAGCTCGTCTAAGATATTTTTTAAGTCGAGTGAGCTATGAGCAGAACTTGATTGATGCTTATTCTGGTGAGGGCTGGAAAGGATATAGCTTGGAAAAATTAAAACCTGAGAAGGAGCTTCAACATGCTAAGTCTAAAATACTTGGTTTTAAATTGAAAATTAGGGATTTGTTTCGACATTTGGATACATTGTGTGCTGAAGGGAGGCTTCCCCAATCTTTGTTTGATTCTGAAGGAGAGATTTGCAGTGAGGATATATTTTGTGCAAAATGCAGGTCCAAAGAATTGACCACTGGTAATGATATAATACTTTGTGATGGTGCTTGTGATCGTGGATTTCACCAGTTCTGTTTGGAACCTCCATTGTTATCTGAGAATATTCCAACTGATGATGAGGGTTGGCTGTGCCCGGGATGTGATTGCAAGGATGACTGCTTTGATCTCCTTAATGACTCATTCGGAACAAGGCTCTCTATATGTGATTTCTGGGAGAGGGTCTTTCCAGAGGCAGCTGCTGCTGCTGGGAATAAAGTGGATGACAACTTGGGACTTCCATCAGATGATTCCGAGGATGATGATTATAATCCTGATGTTGCAGATGATGAGGAGGTTGAAGGAGGCGAGTCAAGTTCTGATGAGTCTGAGAATGATTCTGCTTCTGAGAAAATGGAGGCTTCACGTAATGAGGACCCATACTTAGGCCTTCCTTTTGATGATTCAGAGGACAACGATTATGATCCTGATGCTGTAGATCATGACGAAGATGTAGCTGAAGAAAGTTCAAGCTCTGATTTCACGTCTGATTCTGAGGACCTTGCTGATGTAGTTAAGGGTAATGCATTATCTGGACAGGATAACGATCCTGTACCTGCATCATCTTTGTCAGAGCCAGATCCTGTTGAAGAAGAGTCCACTCCTATTTCTGGGAAAAGACACATTGAAAGGTTGGACTACAAAAAACTGTATGATGAGACCTACCAAAATGCTCCATCTGATACTAGCGATGATGAAGATTGGACTGATAGTCCTGCTTTAAGTAGGAAAAAGAAAGTCACTAGCAAAGGGCCGCCAGTGTCACCAAATGGGAAAACCTCAATACCAGATCATATGCAGAAAGAAACTGAAAATACTCCTAGGAGAAATACTCGTCAAACTAAAGTTGAAAATATGGACAATTCGCCCAGTAAATCACTTGAAGGCTCTAAGAGGGCTGGTTCAAATGATAAAAAGCGAGGATCTTCAACTTACAAAAGACTTGTGGAAGATGCAGTTAAGGCACTTTACAAAAACTTTAAAGACAATCAGTACCCGGATCGTGCCACAAAAGAAAGCTTGGCACAAGAACTTGGACTTACTTTCAAACAGGTTAGCAAATGGTTCGAGAATGCTCGTTGGAGCTTTCGGAATTCCCCACGTATGGAAGCCAGGGCAAATAAAAGTGCTTCACGGGGTGCCCCTTCCAGCAGAGTTGAAAATGAGATGCCACTTGGGGATGAGAAGAGGGACTCAAAATCAGTGTCCCAGGAGGGGAATATACAGAAATCAAAATCCCAGAGCTCTATAAAGAGGAAGCATATTACAGATACTGAGGAATCTGATGCAAATATAAACATTGATAGCGCAGCAACAAATCCTCTTGTTCCCTCACCCAAAGGTGGTGAAGTGCAGAGAAATCGCAGAACGAAAACAAGGAAGAGAAAATGA 2790 0.4125 MEAPSDQMNSKTGELMHHNNNTSDQLHTIDSGITHSELPEKPNEIGSESLDDEQRVIGTRETTFLLDEKSPSDGVTGNSAIQLPSQPPCDLDKSCQTEEGSGFQHKTFELGNSIGMDASSENLSSKTRKSLCHIHNTSEQLHTLDPRTALFKTSEKTNQTGSKLLNNEQRVLGSEETSSLLDEKQLTVSDSMIGDSVIQLPTQSQCDLDNSCQNGGGSCFQHNTLKQVSGFLSNDQSQNKRQQVSKNENNEPVERSGAIEQLDLPSQETPRGSSPNSLQRNSKRATRARLGCKDKRTTTSLKKKYILRSSDRVLRSRVREKPKPSQSNTNLVNGDHVGENRRKGRKKNKGRGRIVTDEYSRIRARLRYFLSRVSYEQNLIDAYSGEGWKGYSLEKLKPEKELQHAKSKILGFKLKIRDLFRHLDTLCAEGRLPQSLFDSEGEICSEDIFCAKCRSKELTTGNDIILCDGACDRGFHQFCLEPPLLSENIPTDDEGWLCPGCDCKDDCFDLLNDSFGTRLSICDFWERVFPEAAAAAGNKVDDNLGLPSDDSEDDDYNPDVADDEEVEGGESSSDESENDSASEKMEASRNEDPYLGLPFDDSEDNDYDPDAVDHDEDVAEESSSSDFTSDSEDLADVVKGNALSGQDNDPVPASSLSEPDPVEEESTPISGKRHIERLDYKKLYDETYQNAPSDTSDDEDWTDSPALSRKKKVTSKGPPVSPNGKTSIPDHMQKETENTPRRNTRQTKVENMDNSPSKSLEGSKRAGSNDKKRGSSTYKRLVEDAVKALYKNFKDNQYPDRATKESLAQELGLTFKQVSKWFENARWSFRNSPRMEARANKSASRGAPSSRVENEMPLGDEKRDSKSVSQEGNIQKSKSQSSIKRKHITDTEESDANINIDSAATNPLVPSPKGGEVQRNRRTKTRKRK 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0272 929 MobiDBLite consensus disorder prediction 72 98 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 597 627 - -
Lele35g0272 929 CDD PHD_PRHA_like 449 501 IPR045876 -
Lele35g0272 929 Pfam Homeodomain 782 827 IPR001356 GO:0003677
Lele35g0272 929 ProSitePatterns Zinc finger PHD-type signature. 450 501 IPR019786 -
Lele35g0272 929 SMART HOX_1 774 836 IPR001356 GO:0003677
Lele35g0272 929 MobiDBLite consensus disorder prediction 827 929 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 547 576 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 749 763 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 764 779 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 855 869 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 233 295 - -
Lele35g0272 929 ProSiteProfiles Zinc finger PHD-type profile. 447 504 IPR019787 -
Lele35g0272 929 SUPERFAMILY Homeodomain-like 783 834 IPR009057 -
Lele35g0272 929 SMART PHD_3 449 502 IPR001965 -
Lele35g0272 929 MobiDBLite consensus disorder prediction 730 748 - -
Lele35g0272 929 FunFam Homeobox protein HAT3.1 430 506 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 311 353 - -
Lele35g0272 929 ProSiteProfiles 'Homeobox' domain profile. 772 832 IPR001356 GO:0003677
Lele35g0272 929 MobiDBLite consensus disorder prediction 233 254 - -
Lele35g0272 929 Gene3D - 774 845 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 262 284 - -
Lele35g0272 929 CDD homeodomain 783 832 IPR001356 GO:0003677
Lele35g0272 929 MobiDBLite consensus disorder prediction 665 684 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 1 27 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 835 849 - -
Lele35g0272 929 SUPERFAMILY FYVE/PHD zinc finger 439 507 IPR011011 -
Lele35g0272 929 Pfam PHD-finger 449 504 IPR019787 -
Lele35g0272 929 MobiDBLite consensus disorder prediction 67 98 - -
Lele35g0272 929 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 238 894 - -
Lele35g0272 929 MobiDBLite consensus disorder prediction 539 779 - -
Lele35g0272 929 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 443 506 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0272 Lele-ChrLele35 1644041 1648032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0272 287 833 Homeobox Transcription Factor Family AT3G19510 46.459 9.86e-136 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Lele35g0272 PHD 8.4e-11 CL0390