Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0265 ATGTCTCCGACAAGGCATGCCATATTAGAATCATTTAAGGATCCTTTGTCTGTAGGAGGAGTTGTTAAACCAAAAGATGAGGATCTAGATGCCGTTGTTGTATCAAGTTATCAACACTTGAAGTCAACCTCAAGATATGTTGAGATCGTGGGTGGTGACCATTTTGTAAGGACAAAGCAAATGGAGAAGGCACTAAGAGCATACATGGAGGTTCTGAGGCTGGTGAGGCGTTTGCCGAAGGACACAAGACCTTATTACGCCAAGTACGCACGCGAGAACTTCGTCAATTACCGAGACGTCGATGCTGCAGATTCTACCGTTCTTGAGGATCTTTTCAACCGCACCTATCGTCATTCCGTGTGGGTTCTCGATAAGTATTCGGTGGACAAATCTGCTGCGGATAGGCTGAAGGATATCTGCTGCTCATTGATTAGTCCTCTCTTTGGCAAAACAGAAGTTGGGAATGATCTCATCACTTCCAAACCAGTGTCCGATGCAGAAATTCCTGAGACCAGACCCATTCATATGGACGACGACGACGACCTCCACGGGGACCACCTTCTGACCCCATCCTCTTCTACTTTCTCTCAGCTTCTTTTCGGACAAGACGAAGATGTGGACCATCACCACTCTCTTTTCTCCATCGGGAATGGCGACTCCCCCAAAATGCTCTGCTTCGAGGGCTATCCAAACAATCGACCCGACCTCTTGGTCTCTGAAACCAACGCTGTTACTCCTCAGAAGTCCGTCATCACTTCCAGCGAGTCCTCCTCTGCTTCTTCCTCCGCCAACCATAGCACTAATAAAAAGCGATGTGTGTCGGCGCAGGAAGTGGTGGGCGGCACGGATTCCGTTTTCACGGCGGCGGCTGGTGGTGGCCGGAGACAATCGAAGAAGGCGAGAGCGGAGAACCCCACTTCAACAGGACATGCAAAGAGGAAGGAGAAACTTGGGGAACGAATCGCAGCGTTACAACAGCTCGTTTCTCCATTTGGGAAGACAGATACAGCTTCGGTGCTTCACGAGGCGATGGGATACATAAGGTTTCTCCACGACCAAGTTCAGGTCCTCTGCTCGCCATACTTGCAGGCACAGCTCCCTTCTTCACCTCATTTTCAGACTGGTGAATCAGTTCCATGGTCCATCAGACCCCCTAATCACTTAACAAACAACTCTTGTGCATTTTACAAAACAAAACTCTTCTACTATTCCAAGATCTCAAGTGATTCAATCCTCCAGTGGTCAACCGGTTCAGTGATGGGTTCACAGCTATTTGCGGTGACTGAGCAGTCAAAGTGTGACAGAATATTGGGATATGAAGGGAGTGATGATAATATTACTGTGCGTGCATTATTTCAGGGGGATCGAGTTACCATGAACATGAGAGAAGAAGCCAAAGGAGAGTTGAGTAGCAGAGGACTGTGTCTGATCCCGGTGGAATCCACCGTGCACGTGGCTAGCAGTAACGGTGCCGATTTCTGGTCACCTGCGATGGGGAATCATGTTTCGTCATCAACAAGACCCTGA 1527 0.4879 MSPTRHAILESFKDPLSVGGVVKPKDEDLDAVVVSSYQHLKSTSRYVEIVGGDHFVRTKQMEKALRAYMEVLRLVRRLPKDTRPYYAKYARENFVNYRDVDAADSTVLEDLFNRTYRHSVWVLDKYSVDKSAADRLKDICCSLISPLFGKTEVGNDLITSKPVSDAEIPETRPIHMDDDDDLHGDHLLTPSSSTFSQLLFGQDEDVDHHHSLFSIGNGDSPKMLCFEGYPNNRPDLLVSETNAVTPQKSVITSSESSSASSSANHSTNKKRCVSAQEVVGGTDSVFTAAAGGGRRQSKKARAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQAQLPSSPHFQTGESVPWSIRPPNHLTNNSCAFYKTKLFYYSKISSDSILQWSTGSVMGSQLFAVTEQSKCDRILGYEGSDDNITVRALFQGDRVTMNMREEAKGELSSRGLCLIPVESTVHVASSNGADFWSPAMGNHVSSSTRP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0265 508 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 366 IPR036638 GO:0046983
Lele35g0265 508 CDD bHLH_AtbHLH_like 312 357 IPR045239 -
Lele35g0265 508 MobiDBLite consensus disorder prediction 296 316 - -
Lele35g0265 508 Gene3D - 296 368 IPR036638 GO:0046983
Lele35g0265 508 MobiDBLite consensus disorder prediction 247 271 - -
Lele35g0265 508 FunFam Transcription factor bHLH113 294 364 - -
Lele35g0265 508 MobiDBLite consensus disorder prediction 287 316 - -
Lele35g0265 508 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 301 350 IPR011598 GO:0046983
Lele35g0265 508 PANTHER OS01G0342800 PROTEIN 61 141 - -
Lele35g0265 508 CDD Complex1_LYR_LYRM9 64 125 IPR045291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0265 Lele-ChrLele35 1615466 1620645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0265 286 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 61.250 1.92e-21 95.1