Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0258 ATGTGGGACGAAGCCGTTGAGGAGTCGCAGTGCCAGGAGTCAGGACTCAGAAATGCAGAAGGGCTAAAGCTGAGGAACCATCCACAAATCTTTTCTCCGACTTCTTGCGTTCTGTTATGCGATAGCGCCCCTAAGAGGACTCTGTTGTGGTGGTACAAAACACAGGATTCGGCAACAATGGAGGCGCAGCAGAGAGACGTGGATCGGGTCAAGGGACCATGGAGTCCCGAGGAGGATGAGTTGTTGCGCAAGCTCGTGCAACGGTACGGCCCCCGGAATTGGTCCGCCATAAGCAAATCAATACCCGGCAGGTCCGGGAAGTCTTGCCGTCTGCGGTGGTGCAACCAGCTATCGCCGGACGTGGAGCACCGGCCATTCACACCGGAGGAAGATGAGATCATCATCCACGCCCACTCAAAGTTCGGCAACAAGTGGGCCACCATAGCGAGGCTTCTGAACGGCCGTACGGACAACGCGATAAAAAATCATTGGAACTCGACCTTGAAGCGCAAGTATTCGTTGTTGATCGCCGATGAAGGCGCCAGAATCGATGGGCCTCCGGAAAAGAAAGTAGCCATTGTGGAACGCGCTGTGCCGATACAGTCATTGCCGCCGGGAGGCCACTCTTACAGCCCAGACAGTCCATCAGGATCTGATGTTAGTGATTCAGGTCTTCCCGCCGTGGTTTCATCTTCGATGGCGATTCGTCCTGTAGCAAGAAACTGCGCAATCTTGTCTCCTTCCCAGCAGGTCGAGTCGCGCCCGAGTCCAATCTTCAACTTAAACAAAGAGCCTTGCACTGATCTTAGTCTGTCCTCTCTGGGAGCTGAGTTGAAGGAGTCACAGATGATTCAGAGTCCTGGTTCTAGGACCGAGGCAGCAAAGCAGTCTGAGAAGTTGTCGTCAATGGCGACATTTGGGCCCGATTTACTGAAGGTGATGAAGGAAATGATAAGGGAGGAAGTGAGAAATTACATGGAGGGACATAATGGTAGATTGTGCTCTAATCCTGACGGTGTGAGTGCTGGAGTTTCAAAAATGAGGCGGTGGAAATATCAGGCTCTGCTTCACCGTCGTTTTTACTTTTTACACCTTCGCCATTTGAGCTCCGGCAGAAGGTCCGAGAAGGAGATCGCTGCCATAGCTTTTGGACAATCCTCGATCCTCTTCGAATCGGGAAGACAGCAAGCCAAGATGTTGCCCACGGCCTCCAAAGGACGCCCCTCGTCCTCTTCGTCTCGAGCTAATCCCATGTTGCTTCAGTATCTCCGCCGAATTGTCAAGTGGCAACAAATGGATATTGAGTATACTTTCTGGCAAATGCTTCACCTTTGCACCTCACCAAAAGTTGTCTATCAGCATACTAAATATCACAAACAAACCAAGAATCAATGGGCACGTGACGACCCTGCTTTTGTTGTGATCTGCAGCCTTCTTTTGGCCGTCGCAACTCTAGCATATTGTGCAGCCTATGATCATAGTGCTGCACATGCACTTTTTGTCATATTCTCAGTATTGGTTTTCCACTTTTTGGTGTCTGGAGTAGCTCTGGCAACATTTTGTTGGTTCCTGACTAATTCTTATCTTCGAGAAGAGGCTCCTAATAGTTATGTAGTTGAGCAGCGTGTTGAATGGCTATACGCATTTGATGTGCACTGCAACTCCTTCTTCCCTATGTTTGTCTTGCTTTATGTGATCCATTATTTTCTTTCTCCTCTATTGGTGGCTCATGGTTTCATTCCAGCATTGCTGTCAAATTTGCTATTCATGGTGGGCGCTTCATACTATCACTATCTCAATTTCTTAGGTTATGACGTTCTGCCCTTTTTGGAGAGGACCACTTTTTTTCTGTACCCGATTGGTGTTGTCATCATCCTTTCTCCTATTTTGATTTTGGGTGGCTTCAATCCTTCTAAATATTTCATGAACATGTTCTTCAGTCGACAAATGTGA 1953 0.4864 MWDEAVEESQCQESGLRNAEGLKLRNHPQIFSPTSCVLLCDSAPKRTLLWWYKTQDSATMEAQQRDVDRVKGPWSPEEDELLRKLVQRYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPDVEHRPFTPEEDEIIIHAHSKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSLLIADEGARIDGPPEKKVAIVERAVPIQSLPPGGHSYSPDSPSGSDVSDSGLPAVVSSSMAIRPVARNCAILSPSQQVESRPSPIFNLNKEPCTDLSLSSLGAELKESQMIQSPGSRTEAAKQSEKLSSMATFGPDLLKVMKEMIREEVRNYMEGHNGRLCSNPDGVSAGVSKMRRWKYQALLHRRFYFLHLRHLSSGRRSEKEIAAIAFGQSSILFESGRQQAKMLPTASKGRPSSSSSRANPMLLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHALFVIFSVLVFHFLVSGVALATFCWFLTNSYLREEAPNSYVVEQRVEWLYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPALLSNLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIILSPILILGGFNPSKYFMNMFFSRQM 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0258 650 Pfam UNC-50 family 422 645 IPR007881 -
Lele35g0258 650 Gene3D - 125 171 - -
Lele35g0258 650 Pfam Myb-like DNA-binding domain 71 117 IPR001005 -
Lele35g0258 650 Pfam Myb-like DNA-binding domain 125 167 IPR001005 -
Lele35g0258 650 FunFam Transcription factor MYB44 125 171 - -
Lele35g0258 650 MobiDBLite consensus disorder prediction 207 223 - -
Lele35g0258 650 Gene3D - 70 122 - -
Lele35g0258 650 ProSiteProfiles Myb-like domain profile. 118 168 IPR001005 -
Lele35g0258 650 SUPERFAMILY Homeodomain-like 68 164 IPR009057 -
Lele35g0258 650 FunFam MYB transcription factor 71 122 - -
Lele35g0258 650 CDD SANT 73 115 IPR001005 -
Lele35g0258 650 ProSiteProfiles Myb-like domain profile. 66 117 IPR001005 -
Lele35g0258 650 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 172 IPR017930 -
Lele35g0258 650 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 121 IPR017930 -
Lele35g0258 650 MobiDBLite consensus disorder prediction 202 223 - -
Lele35g0258 650 PANTHER PROTEIN UNC-50 HOMOLOG 404 647 IPR007881 -
Lele35g0258 650 CDD SANT 125 168 IPR001005 -
Lele35g0258 650 SMART sant 70 119 IPR001005 -
Lele35g0258 650 SMART sant 122 170 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0258 Lele-ChrLele35 1561042 1570914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0258 67 326 MYB Transcription Factor Family AT5G67300 48.057 3.65e-68 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele35g0258 UNC-50 1.5e-77 No_clan