Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0236 ATGCCTGAAGAGAAAGGATCTCTAAACAAGCACCAGATGGGATCATGGGATCTATCGATTCCTGGCGAGAAATTATCAAACATGGATCCACCACCGATCATAGGAAGCTCTTCCAACAATAATGTCCCTCTCATTGCTGACCAGAACCACCAAGTCGACGACGGAGTTAATGCTGAGGATGATAAGACGGCGCCGTCGAGGACAATCCGAGGTGGAAGGAAGAGGACAACTGGTCAGACCGCCGGAGGAGAAGGGGAAGGTGCGAACGGAGCTGGTGGTGAAGCCACCGATGATCACGAGATGCACATATGGACAGAGAGAGAGAGGAGGAAGAAGATGAGAAACATGTTCGCTAACCTTCATGCTCTGCTTCCCCAGCTTCCTGCTAAGATGTATGCTGAGGGTGATAAGACGGAGCCGTCTAGGACAATCCGAGGAGGAAGGAAGAGGACAACTTGTAAGACCGCCGGAGGAGAAGGGAAAGATGCGAATGGAGCTGGTGGTGAAGCCATCGATGATCACGAAATGCACATGTGGACAGAGAGAGAGCGGAGGATGAAGATGAGAAACATGTTCGCTAACCTTCATGCTCTGCTTCCCCAGCCTCCTGCTAAGGCTGACAAATCAACCATTGTTGATGAAGCGGTGACGTACATTAAAAGCCTGGAGATCACCGTGGAGAATCTGGAAAAGAAAAAACAGGAAAGGCTGAAGCAAGCCCAGCAATCTGCTGATTCAAGCACCACCATTGCGTATGATCCTTCTTCTGTGAATATCAACTCTCAGAAGCATCCCTATGTGTCAAGGGAGGCATTCATGGCTGATCATGGTGGATCTTCCAATCATAATTCAAGCACTAATAACAACTTGGCCTCCACCACAAAAGCCATTGCTATTGGAACTTCACCTTCACTGTTACTTCCCGGAGCTGGGAATAACCCAGTGGGGTTTCAGACTTGGAGCTCTTCAAATGTTGTCGTCAATATTTGTGGTGATCAGGCTCATTTCAATGTGTGCTACGTCAAGAGGCCAGGCCTCTTCACCAGCATATGTACTTTGTTTGAGAGGTACAAGATTGAGGTTTTGTCTGCTCATGTTTCATCTGATGATTCTCGATGCTTTTACATGATTCATGCACTGGCAAAGAGAGGTTCAAATGAGGCACTTTCAACGAAGGACAGTTTCAGGCAAGCAGCTGGAGAAATGACGCTGTGGCTATCTTAA 1224 0.4796 MPEEKGSLNKHQMGSWDLSIPGEKLSNMDPPPIIGSSSNNNVPLIADQNHQVDDGVNAEDDKTAPSRTIRGGRKRTTGQTAGGEGEGANGAGGEATDDHEMHIWTERERRKKMRNMFANLHALLPQLPAKMYAEGDKTEPSRTIRGGRKRTTCKTAGGEGKDANGAGGEAIDDHEMHMWTERERRMKMRNMFANLHALLPQPPAKADKSTIVDEAVTYIKSLEITVENLEKKKQERLKQAQQSADSSTTIAYDPSSVNINSQKHPYVSREAFMADHGGSSNHNSSTNNNLASTTKAIAIGTSPSLLLPGAGNNPVGFQTWSSSNVVVNICGDQAHFNVCYVKRPGLFTSICTLFERYKIEVLSAHVSSDDSRCFYMIHALAKRGSNEALSTKDSFRQAAGEMTLWLS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0236 407 MobiDBLite consensus disorder prediction 31 47 - -
Lele35g0236 407 Gene3D - 93 152 IPR036638 GO:0046983
Lele35g0236 407 MobiDBLite consensus disorder prediction 134 169 - -
Lele35g0236 407 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 27 131 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele35g0236 407 MobiDBLite consensus disorder prediction 1 96 - -
Lele35g0236 407 Gene3D - 172 247 IPR036638 GO:0046983
Lele35g0236 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 241 IPR036638 GO:0046983
Lele35g0236 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 100 129 IPR036638 GO:0046983
Lele35g0236 407 SMART finulus 180 228 IPR011598 GO:0046983
Lele35g0236 407 Coils Coil 212 239 - -
Lele35g0236 407 MobiDBLite consensus disorder prediction 135 156 - -
Lele35g0236 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 222 IPR011598 GO:0046983
Lele35g0236 407 CDD bHLH_AtbHLH_like 177 230 IPR045239 -
Lele35g0236 407 MobiDBLite consensus disorder prediction 53 68 - -
Lele35g0236 407 Pfam Helix-loop-helix DNA-binding domain 179 223 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0236 Lele-ChrLele35 1454030 1458138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0236 143 407 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 39.721 2.64e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele35g0236 HLH 9.3e-10 No_clan