Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0232 ATGTTCTGTGAGTTTGTGTTCTATTTTGGATTGCTGGCATTTCTGGGAATGCAGCTTCGTCTAATAATGGCAGATTGCCCTTTGGATTTTAGTGGTTCAAACTTTACACTAGCATCCTCTATGTGCTCTAACCAGGTTGAAAGAGGGAAATGTTGCCGCTACATTAATTCTAACATTGCAGTTTCTGTTGCTCGTTTTGCAAATGTAACAAGAAGCCTTGGAGTCACCCCAAATGCTTCCGACCTGTGTCTTCAGACCATATCTCAGACCTTGCAACATTATGGAGTTCCACAAAATGCGACAATTTTCTGTGGTTTTGGCACAAAAATCTCAGTCAATTATGAGTGTGAAGGTCGAACTACTGTTGGGCAAATGCTGCAGTCTCCCCACTTTGGGCAGGTCGTGGAAAATTGTGAAGTGCCACTTGCTGAGGAAAGTAAATGCAAGAAATGCTTAAATGCTGGCATTAATTTCATACATCATCTTATAGGAATTGAAGATAATGTAACACTGAGTACTTGCCGAGATGCCACCTTCGCAGCATTGGCAAGCCAAGTTGATGAAATATCTACGATTGATATTGCAAGCTGTTTCTTTGGGGTTCAAGGGCTTCTCAAACCTCGTGCTTCAGAGCCATCCCCATCTTTGCCAACTCCTGAAGCTTCTCCTAGTCCACTGGTTGCTGATAGCCCGAGCCAGTCACTGTTAGGGGTACCTCTTAAGGGAAAACGCCGTTCATATCACTTGACAATAATTCCCGTTATTGGCATTTCCGTCACAGTTGTTGCTGCTATCATGCTCTTGGTCTTGATTGTTCTAATTCGTCAGAGAAAAAGAGAACTGGAGGTGCCTGATAATTTTAGTAAAGCCTCTTCAAAAGCTACACCTTCTTGTGCAATGTGGAAATTTCAGGAAGGTCCTTCATCTATGCTTCGAAAATTCAACTACAGGGAGATAAAGAAGGCAACAGAGGATTTCAGCACCACCATTGGGCAAGGGGGATTTGGAACAGTATATAAATCTCATTTCAGTGATGATCTCGTGTTAGCAGTAAAGAGAATGAACAAAGTTTCAGAGCAAGGGGAGGATGAATTTTACAGAGAAATAGAGCTTCTTGCTCGGTTGCATCATCGGCATCTTGTTGCATTACGAGGTTTTTGTGTTAAAAATCATGAGAGGTTTCTGATGTATGAGTACATGGAGAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAAGCACCTCTAAGTTGGCGAACGAGAATCCAAATCGCCATTGATGTGGCCAATGCACTGGAGTATCTACATTTCTATTGTGATCCTCCCCTATGGCACAGAGACATAAAATCTAGCAACATTTTACTGGATGAGAATTTTGTTGCTAAGTTAGCCGATTTCGGTCTTGCACATGCTTCAAAAGATGGCTCCATATGCTTCGAAGCTGCAAACACCAATATCATGGGAACTCCAGGTTATATGGATCCTGAATATGTAGTTACTCATGAGCTGACTGAGAAAAGTGATATTTACAGTTATGGAGTATTACTGCTAGAAATTGTGACAGGAAGACGAGCAATTCAAGATAATAAAAATTTGGTTGAATGGGCACAGCCATACATGGGACCGGATTCTGTAACACGATCGATGGAGCTGGTGGATCCAAGTGTGAGAGAGTCATTTGATTTGGATCAGCTGCAGACAGTAGTGTCTATAGTAGAATGGTGCACACAGAGAGAAGGCAGGACAAGGCCTTCAATAAAACAAGTTCTTAGGCTTCTGTATGAGACATCAGAACCTATGCACGGGGGGTTTCTTGAAGATGTTGAAAATGAAGAAGAATGTGATGGGAATCAGCAGAGTGGCAGAAGTAGCAGAGGTAAAATACACAGAAATGAAGCATTATTTCAGAGGGGGGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCGAGGTCTTATTGCAGCAGAAGTTTCTTACTTGAGACAAGTTCCCCCCAGTCTCCTTTGAATATATTATCCGTCGAAGACAAATATCATTAG 2043 0.4195 MFCEFVFYFGLLAFLGMQLRLIMADCPLDFSGSNFTLASSMCSNQVERGKCCRYINSNIAVSVARFANVTRSLGVTPNASDLCLQTISQTLQHYGVPQNATIFCGFGTKISVNYECEGRTTVGQMLQSPHFGQVVENCEVPLAEESKCKKCLNAGINFIHHLIGIEDNVTLSTCRDATFAALASQVDEISTIDIASCFFGVQGLLKPRASEPSPSLPTPEASPSPLVADSPSQSLLGVPLKGKRRSYHLTIIPVIGISVTVVAAIMLLVLIVLIRQRKRELEVPDNFSKASSKATPSCAMWKFQEGPSSMLRKFNYREIKKATEDFSTTIGQGGFGTVYKSHFSDDLVLAVKRMNKVSEQGEDEFYREIELLARLHHRHLVALRGFCVKNHERFLMYEYMENGSLKDHLHSPGKAPLSWRTRIQIAIDVANALEYLHFYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEAANTNIMGTPGYMDPEYVVTHELTEKSDIYSYGVLLLEIVTGRRAIQDNKNLVEWAQPYMGPDSVTRSMELVDPSVRESFDLDQLQTVVSIVEWCTQREGRTRPSIKQVLRLLYETSEPMHGGFLEDVENEEECDGNQQSGRSSRGKIHRNEALFQRGDGRYLASSSSTSRSYCSRSFLLETSSPQSPLNILSVEDKYH 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0232 680 SMART serkin_6 324 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0232 680 FunFam Putative receptor-like protein kinase 400 602 - -
Lele35g0232 680 PANTHER OS01G0750732 PROTEIN 161 620 - -
Lele35g0232 680 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Lele35g0232 680 Pfam Protein kinase domain 328 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0232 680 FunFam Putative receptor-like protein kinase 292 399 - -
Lele35g0232 680 CDD STKc_IRAK 330 594 - -
Lele35g0232 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lele35g0232 680 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Lele35g0232 680 SUPERFAMILY Protein kinase-like (PK-like) 308 597 IPR011009 -
Lele35g0232 680 ProSiteProfiles Protein kinase domain profile. 324 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0232 680 Pfam SPARK 25 169 IPR043891 -
Lele35g0232 680 MobiDBLite consensus disorder prediction 610 632 - -
Lele35g0232 680 MobiDBLite consensus disorder prediction 209 230 - -
Lele35g0232 680 Gene3D Phosphorylase Kinase; domain 1 288 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0232 Lele-ChrLele35 1432043 1436371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0232 21 674 Receptor kinase-like Gene Family AT3G19300 60.152 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lele35g0232 Pkinase 1.1e-49 CL0016