Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0231 ATGGGTACCCTTGATAAATCAACAACAATGGTGTCTTCAGACTCCTCAGAACAGAAGGGGAAAAATATGGCTGAATCAAGTGTCAACATGATTCACTGTCCTTTGATCCAGCAGCCTCGTAGGTCCTTGGATGGCCCAGTGGCTATTCTGTGGGATATTGAGAATTGTCCAGTTCCAAGCGATGTGCGCCCTGAAGATGTAGCTAATAATATAAGAATGGCTTTGAGGGTGCACCCGGTGATTAAAGGAGCTGTTATGATGTTTTCTGCTTATGGCGATTTCAATGCCTTCCCCAGGCGACTCAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGATAAGGCTATCTTGGTGGACATGTTCTTATTTGCCCTTGACAACTCTCCCCCTTCCTCCATCATGCTGATATCTGGGGATGTTGATTTTGCTCCAGCACTTCACATTCTCGGCCAACGTGGTTATACAGTTATTCTTGTCATCCCAGCTTGCGTGGGTGTTTCATCTGCCCTAAGTAATGCTGGAAAATTCGTTTGGGACTGGCCTAGTGTGGCTCATGGCGAAGGCTTTGTGCCTCCCTCAAAGGCTTTAGTTCCACCTCGTGTGAATCCAGCTGAGGTTGCTGGATATCTGATGGGGATCCATATCAATGACAATACTCATGGACAAAATGAAGAAGAAGCAATAGTTTACGGAGGAATGTCACAGAGCTATTATAACTCTAGGGATTTCTCAGTTGTGTCACAATCGCTGTCTGAATACAACAGTAGCACATTAAACGGGGCCTCTCTTCCCACAACTTTAAGGTCACACAGCCTTCCTAATGGATTTAGTGATGCTTCAGGAGCACCTATGTCTTCCACTGACCAAAATGAATGCCCATTGTGGGTACAACCTGGGGATTTAAATGGTCTCAAGGGCCAGTTGGTAAAGTTGCTTGAACTTTCAGGGGGATGCCTGCCTCTGACTCGTGTTCCAGCTGAGTACCATAAATTTTTTGGGAGGCCCCTTTATGTATCAGAATATGGAGCATTCAAGTTAGTAAATCTTTTCAAGAAGATGGGTGACACCATGGCTGTAGAAGGGAAGGGGAATCGGAAGTTTGTGTATCTTCGGAATTGGAAAGCAAGCCCAAGTGCGCCTCCTTTGTCTCTGGCACAGAAAGATAAGAAAGGAAGGGGGGCTCAGGAAGAGAATGTGGATGTTGTCACCGGTGGATGCTTTTCAGATGAGTTCTCAGATGAAGACAGAATAGTCATTGAAGAGCAGTATGAGAGAAGTGGAATAGGAAAGAGCCATCAGGGAAGAGCATCCAGATGTGAAATTGATGACAATCTTGAGCAGTTCAAGTATGAGCTACAGGAGATTCTAGTCAGCTATTCTTGCCGAATATTTCTGGGTTGCTTTGAAGCAATATACCAGCAACGGTATAAGAAACCACTGGAATGTCAGAGATTTGGTGTGGACAGGATGGAGGATTTGCTCGAGAAAGTGAGTGACGTGGTGGAATTACACGAAGAACCAGTAAGTAACAGGAAGTTCCTGGCTGCTGTGGGTGGGTAG 1593 0.4564 MGTLDKSTTMVSSDSSEQKGKNMAESSVNMIHCPLIQQPRRSLDGPVAILWDIENCPVPSDVRPEDVANNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNSPPSSIMLISGDVDFAPALHILGQRGYTVILVIPACVGVSSALSNAGKFVWDWPSVAHGEGFVPPSKALVPPRVNPAEVAGYLMGIHINDNTHGQNEEEAIVYGGMSQSYYNSRDFSVVSQSLSEYNSSTLNGASLPTTLRSHSLPNGFSDASGAPMSSTDQNECPLWVQPGDLNGLKGQLVKLLELSGGCLPLTRVPAEYHKFFGRPLYVSEYGAFKLVNLFKKMGDTMAVEGKGNRKFVYLRNWKASPSAPPLSLAQKDKKGRGAQEENVDVVTGGCFSDEFSDEDRIVIEEQYERSGIGKSHQGRASRCEIDDNLEQFKYELQEILVSYSCRIFLGCFEAIYQQRYKKPLECQRFGVDRMEDLLEKVSDVVELHEEPVSNRKFLAAVGG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0231 530 MobiDBLite consensus disorder prediction 1 24 - -
Lele35g0231 530 CDD LOTUS 312 381 - -
Lele35g0231 530 CDD LOTUS 456 518 - -
Lele35g0231 530 Pfam OST-HTH/LOTUS domain 456 518 IPR025605 -
Lele35g0231 530 Pfam OST-HTH/LOTUS domain 313 379 IPR025605 -
Lele35g0231 530 Pfam NYN domain 46 185 IPR021139 GO:0004540
Lele35g0231 530 ProSiteProfiles OST-type HTH domain profile. 311 383 IPR025605 -
Lele35g0231 530 Gene3D - 23 192 - -
Lele35g0231 530 CDD PIN_limkain_b1_N_like 46 172 - -
Lele35g0231 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Lele35g0231 530 PANTHER LIMKAIN B LKAP 38 489 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lele35g0231 530 Gene3D - 311 380 IPR041966 -
Lele35g0231 530 Gene3D - 451 523 IPR041966 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0231 Lele-ChrLele35 1429713 1431305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0231 43 197 C2H2 Transcription Factor Family AT5G61190 41.290 1.49e-26 112