Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0221 ATGTCCTCCAACACATCATCCAGCCTCCTCCCTCCTCCCTCCCCCTCTCTTTGGCCCCCCTCCGCCCTCACTCCCGACCAAGAACACTCTGTCATCGTCGCCGCACTCACCAACGTCGTCATTGGCTCCACCGCCGATCTCACCCACCAGTTCAACTTACCCCTTTCCTCTGCCGCCGCCGGGAACACCGTCCACAATGCCAACCGCGTGGCCCCTGCCCTGAATGTTGGAGTCAGCCGTTCCGATTTCGGATTCGCCTCCTGCTCCGACCACAAGATTTTACCAGAAGAGAAGACCAAGAATGGTGGGAACAAACAGCCGCAGAAGAGGGCGAAGAAGAAGTACAGGGGAGTGAGGCAGAGGCCCTGGGGGAAATGGGCCGCGGAGATTCGAGACCCGAGACGGGCGACCCGGGTCTGGTTGGGAACCTTCAAGACGGCCGAGGAAGCAGCTCAAGCGTACGATAAGGCAGCCATCGAGTTCCGTGGGCCCCGCGCCAAGCTGAATTTTCCTTTCTCTGATGACTCGTTGCTGAATTTGCAGGCCAGTCAGCCACCGGAAGCTCCTTCAACGGCGGGGCCTCTGGGGACAGCAGCGTCAGAGGCAGGGCACGGGAATACAGAGAATCCGAACGGCGGAATGGCCGCGATGGTGTCTGAGGACGGTGAATTCTGGGATAGGATTGGAAAAGCAGATTTGGAACAGTGGTGGAGGGATTTTGCCGCCGGAGACGCTTCGGACTCTGCTCCCGGAACTACTCAGAGTTGGTGA 771 0.594 MSSNTSSSLLPPPSPSLWPPSALTPDQEHSVIVAALTNVVIGSTADLTHQFNLPLSSAAAGNTVHNANRVAPALNVGVSRSDFGFASCSDHKILPEEKTKNGGNKQPQKRAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFKTAEEAAQAYDKAAIEFRGPRAKLNFPFSDDSLLNLQASQPPEAPSTAGPLGTAASEAGHGNTENPNGGMAAMVSEDGEFWDRIGKADLEQWWRDFAAGDASDSAPGTTQSW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0221 256 MobiDBLite consensus disorder prediction 179 220 - -
Lele35g0221 256 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Lele35g0221 256 PANTHER DNA-BINDING DOMAIN 98 198 IPR044808 GO:0003700|GO:0009873
Lele35g0221 256 SUPERFAMILY DNA-binding domain 114 173 IPR016177 GO:0003677
Lele35g0221 256 MobiDBLite consensus disorder prediction 94 118 - -
Lele35g0221 256 MobiDBLite consensus disorder prediction 1 22 - -
Lele35g0221 256 CDD AP2 113 171 IPR001471 GO:0003700|GO:0006355
Lele35g0221 256 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Lele35g0221 256 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Lele35g0221 256 Gene3D AP2/ERF domain 113 172 IPR036955 GO:0003700|GO:0006355
Lele35g0221 256 FunFam Ethylene-responsive transcription factor 2 113 172 - -
Lele35g0221 256 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Lele35g0221 256 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0221 Lele-ChrLele35 1363867 1364637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0221 4 174 AP2-EREBP Transcription Factor Family AT4G34410 42.408 7.19e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele35g0221 AP2 4.7e-15 CL0081