Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0215 ATGCTATTTACCGAGCAAGAGAGATCAAAGCAAGATTATCCAATGAATCCAAGCTTTATAAAGTTAATGATGGCGGCTCACATAGTGCAAGGATTTTCGCTGGGTCTTCCGAAACGTTTCTGTGAGGAACATTTGCCAAAGGAAGATACTATTATGATTGTTCTGGAAGATGAGAATGGAAGAGAATGGGAAACAAGACATGTTGCTGAAAAGATGGGATTAAGTGGTGGGTGGAGAGGGTTTTCCATGGATCACAGTTTCACTGTGGGGGATGTTTTAGTTTTCCATTTAATCCAACCTTCCAAATTCATGGGCAAGAGAATTGGAGGACCACAGAAGGTTGCAAATAAGAACTCAGAAAGATCTGTGAGATCAAAGAGATCAACCCCCGATCCTCAGTCTCCTGCTCTTCAACGAGCAACAGAGATCCAAGCAAAATTATCCAACGAGCATCCAAGCTTTATAAAGACAATGTTGCATTCTCACGGTGTTCCTAAACCTTTCTGTGATCTGCATATGCCAAAGGAAGATACAATGTTTCTTTTGGAAGATGAGGATGGAGAAGAATTCCTAACAAAATATCTTGATCGAAAGATGGGCTTAAGTGATGTTGCTCAACAAAATGATCCAAGCAGCAGCAGAATGATATGTGACAGTACAGCACCATCAGCAGATCAACCTGAAGACACCAGTAATGACCCAGAAGAAAATTCTGGCCTTCAAGTTCTGAACGGGAGATCTATGACCACTTGCCAACAAGTCACAAGTGTTGATACTTTTAGCATTGTGGTTGATGGCTTAGTTCTTGACTCTCTGCTACCCCAACCCCTCAGGATGAAGTACTATGATTTGTGCTGTAGCCAACAAAGTTTTCTGCATGAGCATATTTTGGCAGGTCAAAACTGTGAACTGGTTCTTGGAATGATACGGGAGACAATTAATATTGCTGATGCCATTCGAGGATGCAAGATTACGACGCCTTCACATAGTTTTGACTTGTGGTTTAGAAAGTTGAAGGCTCTTGAAATATGGGGCATGAACGTCAATTTCTTGCTCGTTAGGCTACAACAACTCAGGGGTTTAGCTTCAAAAACTGAGGAGTATAGAGAGGCGAGAAGAGCTCGAGAACAAGCCCAAGAGCAAAAGAAAGGCCTTCAGCTAAGGCTTAAGGAAGTGAAAGAGACCATAAGGAGACTTGATGGTCAGGATGGAAACCTCGAAATAAGAGCGAAGTGGGTTCATGAAGTGGTAACCAAACTTTCCGCCATTATTATTGCAACCATGTCTCCATGGAATCTTGCGAAGTCGGCAGCGGAGGCGATGTTCTCCCGCTGGGCGATGAAGAGGGTTTTCAAGTTCTTGCTGAAGAAGAAATTGGGGCAGGTTATTTTGGGTGATATCGACCTGAACCAGCTGGACGTGCAACTCACTGGAGGAACGATTCAGCTCAGCGATCTTGCGCTTAATGTGGATTACATTAATAAGAAGTTTACCAAGGCAACATCTTTAATTGTCAAAGAAGGGTCAATTAGATACCTGTTGATTCAAATGCCTTGGAGCGGTAAAGGTTGTCAGGCTGAAGTGAATGGGCTTGAACTAGTAATTTCTCCTTCTACAGATAATATTCCAACGGGTGATGAAACTTGTGTTGTTGGCAATAATGATAATGGTAATCTCGAATATGGCTCAACTAGGACTGACCAGGATATGATTATTGATGTTCCAAAATCATCTTCGATGGATGTTCATGAAGGTGTTCAAACTATCGCAAAGATGGTAAAGGGGTTTCTTACAAGCTTCCATGTGAAAATAGCAAATGTAATTGTTGCATATGATCCATCGTTAGATGAGGGTGACAAGAAAAAGGATTGCCATAGGATCCTAGTTCTTTGCATTTCTGAAATCGAGTGTGGAACTTGTTTGTCAGAAGATGCTGATTCAAATGCTGATGTGCTGGGAATAAGCCGTTTAACAAGTTTTGTGAGGTTTCAAGGAGCTATGTTTGAGCTTCTTCAAATAGATGAGGATGATAATTGTGCATCTTCTTCATGTGAATTAGGAGCAAGATGTGGAGAACCTCATTTGGGGCCAACTAAAGCCACGTGTCCAGTCGTGACTGGGAAAAAAGAAGGATTTGGTGGAGAGGTGAAGTTAAATATTCATTGGAAGAGTGGGTCTTTAGACATTCGCAAAGTGGATGCAGTTGTTTCTGTTGATCCTATAGTGTTAAGATTTCAACTTAGCACCATTAAATGGTTCTTATGTGCATGGGAAAGTTATAATAATCTGCAAAAGGATGGACAAGTTTGTACAAATCAGAACTCAAGGGGATCTGCGCAGCTGAAAACTACTTTGTTGTGCCATTCATCAAATTCAGTCTCTGTTGGCAGTGCTGATTATCACAGTTTTCTGGATGGTTCCTCTAATTTGACCTCCCTGGAACCCCCTACTGAACCTTTAGTTCCTGAGTCTCGTTTTATATCAAATTGGGTACCTTTGTCTGCTGATATAAATCATAAAGATGTTATTCGGGAAATTGATTTTGGGGCCAGTGTGGACCAGTTTTTTGAATGTCTTGATGGAATGAGGAGCTCCCAATCAGCTTTGGGGAGCAGTGGAATGTGGAACTGGACATGTTCTGTGTTTAGTGCTATTACTGCTGCGTCCACCCTTGCTTCTGGATCCTTGCATACTACTTCTGAAAAGCAACATGTGGAAACGAATTTCAGAGCAACGTTTGCTGGAATATCTGTTCTGTTGTCTTTCAGTGATGAAGAGCAGGGGTACTGTTATGGGCCAAACACTGATAATGTAGGTGGATTGCAGATCAATTATCTTGTTGCGGACAGCAATGAAATTCTTCTTTCTCTGCAGGTATGCCCTCAAGCTACAATTGTTGAGGGAATGATGAAAAATATGGAAATTGCTACATTTTTGAATTCTGGAATTGATGCTATAGATTCTGGTGTACACGGATATAATAATGCTAAGAATCAAAATGCTTTGGTCCAACATCTACAAGCTGAAGTCCTTCGTGCTCTCCCATCATCTGTTTCTTGTGATCTAGGTCCTGATTCTGATTCTTTATTTGGATTAGTTGCAACAGACCTTCCATTGGGAAATAATGATAGCTTATTTAAAGTGACATTGTTTAAAACTTCTGGTGTCACCAATTGCAAATTCACGTTGCAATCAAGTTCTGATGGAAGTCTAACTGGACCACTATCATTTTCTTTGAGCCTGCCACCATTTACTTTCTGGGTAGTATTTTCTGTTATAAGCGTGTTCACTAACCTGCTTAAGAATGTTGAACAATCAGTGGAAGTGTTCAATAAAGCAAACAAAGATGTATATAAAGCCTCGGATAAGAAGGAAGGTTCTGGTTCCTGTGTAACATCCCTTTGCACAACAGAACGTTTGCGTGGTGATATATCAATTTCTGGTGCAAGAGTAATACTGTGTTTTCCTTCAGAAAGAGGGAGAGATCATGCATGCTTCTTTTCTTGGGAACAGTTTATTGCTCTTGATTTTACCTCACCATCACCTTTGAAGAAGAGTTTCGCTTCAGATTGTATTCCAACATCAAATGCAAGCTCAAAGAGAAGATTTCCTTCAGCAGATGCAAAATCTCTGCAACTGAGTTTCAGTGATTTGTGCATGTACTTGATTACGTCAACGAGTAATGATTGCAGTAGAATTAGTTCCTGTAGTTTGCAGAATGAAAAGTTTTCTGCTAGTTGCCTTCTGTCTGTTGACAGCCGACCTGGTTGTTACTCTGTTATTAATGTGGTTTGGCAGGAGGGTCTGGTGACTGGTCCTTGGATGACAAAGAAAGCCAGGTTGTTAGCAAATTCTGATCAATTCAGGAGTAGGGATGATTTTGTGGGAAGAGGCTATGAGTTTGCATCTGCATCAACGGTCAAAGACCTGGAGGAATTGAAATCTCAAACTCAACAAGAGATGATTCTAAGTTCATCATTTTTCATTCATGTTCATCTACCTCAAGTTATGGTCAACCTGAGTGATTCTCAATATAAAGATATGTATTGCCTTGTATATCAGATGCTAAATGAATTGGTATGTGTGACTTCTCAGTCGGTCACTGATGAGAATGAGTCTTTTGGTTCACAATCATCAGTATTTGTGGAATGTGATTCTTTAGAAATTGTGATTACCGGGGAGACATCTGAGAGTATCAGGAGCTCATTGCAAAGTGAGCTCCCAGGATCATGGGATCAATTGAAACTGAAAGTTCAAAACTTTGACTTGCTGTCTGTCACAAATACTGGCGGTGTTAGGGGTGCTGAATTTTTCAGATTAACTCATGGTGAGGGCAAGTTGTGGGGTTCCATCAGCAGTGCTCCTGATCATGAGTTTCTTCTAATCACATGCGACAACTCATCAATGAAACGAGGTGATGGGGGAGGCTCTAATCCATTGTCTTCTAGACATGCTGGTTCTGATATCATACATCTGTCCGACCCAGAGATTTCGCATGTTTCTACATCTATAACTGTTGCATGTAGTACAGTTGTTGCTGTAGGTGGTCGCTTGGATTGGTTCAGTGCAATATCATCCTTTTTCAGTTTTCCCTCTTCTGACACCAAAGAATCAGGCGGTGATACTGTGCTAGATGATGTGAAAGGATATTGCAGGACTGACTTTGTTCTCAACTTGATCGATATTGCATTGAGCTATGAGCCTTATGCGATTAATCCAGGGGTTCAAAGTGAAGGCAAAGATTCTGAGTCTGACTTCTTTTATTCCAATCAGGATACGGGTGAACATTGTGCTTCTTGTCTATTAGCTGCATCCTTGTTGACGCTTTCAACTACAGCTTTGGGAGATTCAGTTGAGAATTCTTATCGAATAACTGTGCAAGATCTGGGGCTTCATGTGGTGTCAGGGACAAATACTCTTTGTGGCACTTATAGCGTAGAGCATCTTCAGAAGGTTGGTTTCATTAAAGTCGCTCAGGAAGCATTTATGGATGCTAATTTTAAAACCAACTGTACTAGTGGTATTCTTTGGGTGGTGGAATTGTCTAATTCTCACATCCATGTGGAAACTTGCCATGATACAACTGCTAGTCTGATTCGTTTGGGTACCCAACTTCAACAATTATTTTCCCCTGATGTGGAGGAATCAATTGTGCATTTGCAAAATAGGTGGGATAATGTTCAACAGGCCAAGCTGAGGAATGACCTTAATTATGAAACTAATAACCCTAGCTGCGATACCCTGGCAACAAATTCTCAGCAATGCCCTTCCCAAGCATTTTTGGAGGATGGATCTAGAATGGCTGGCTTAATGGATGAGATATGTGACGATGCATTTCAAGGGAATGACAATAATACATGGCAGCTTTGTTCTTCTGGAGCAGGAATTTACATGCCACTTGATGGTATCTTTATTGATGATATGGATAAGATGAATACGGATGAGCCTGAGGTCCTCTCTCATAAAGGATCTTTGTCTGAGTCAATGCCTCTAATAGGAACAGAAGGTAACCATGCTTTGTTTTTGCAGGAGGATTTCTTTCCAGAGATTATAGAAGAATATTGTTTCTCTGACTTGTGCCCTCTGTCTGAGATATCCATGGGTATACATTCTGAGGAACTACATAGATACAACCAGAGCAATGTGGAAGGTAGAGAGATTGAAAGAGGCAGTGGTGGATGGTATCAGGGAAACTCTCTGAAAGTTGTTGAAAACCACATTTCAGAGAAAAATGAACAAACTGAACTAAAACATTCTGCAGATGGAATACTCCCATCTAATGATAATTCCTCTCAAAATAAGGCCTGTGGATGTGTGATTCTTAAGAAAATTGATCTAAGGTGGAAAATATATGGTGGCTCTGACTGGCCTATGGAGAATGAACAGCATTCTGGGAGAGATACGGCTGTTTGCTTGGAATTTGCATTGTCTGGGATGAAATTTCAGTATGATATATTTCCAGTTGGTGGAGTATCTTTATCCAAGATGTCCGTGTCTGTTCAAGATTTCAATCTGTGTGACACAAGCAGAGATGCAGCATGGAAGCTGGTGCTAGGATATTATCATTCAAAAGGCCGCCCTCGAGAATCTTCCTCAAAAGCATTTAGATTGGACTTGGAGGCTGTCAGACCAGATCCTCTAACTCCTCTTGAGGAGTATAGGTTACATCTTGCCCTCCTTCCTATAAAATTGCATCTACATCAATCCCAGCTTGATTTTCTTCTTGGGTTTTTTTGGAGTAAAAGCTCATCCCCTGATCAATCTCCCGATCATCATCAAGATGTGGAGGGTTCACAATTTCTGCCAGAAGGGAGGAAAAATCTTGTACATACTTCTATTGCATGTGAAGCATTGCTTCCTTACTTCCAGAAGCTTGATATACGGCCTATCCTTGTTCGAGTGGACTACAGTCCACATCATGTGGATCTAGCTGCATTGAGATGTGGGAAGTATGTAGAACTTGTAAATCTTGTTCCCTGGAAGGGGGTTGAGCTAAATCTGAAGCACGTTCATGCAGCTGGCATTTACGGTTGGGGCAGTGTTTGCGAAACTATTATTGGGGAATGGTTGGAAGATATATCTCATAATCAGATTCATAAAATACTGCAGGGCCTTCCTGCTGTACGGTCGTTGATTGCAGTGGGTGATGGTGCTGCTAAGCTGGTTTCATCCCCACTAGAGAACTACAAGAAGGAGCGGAGGGTGCTCAAGGGTATGCAGAGAGGTACAATTGCATTTCTTAGAAGCATTTCTCTTGAAGCTGTTGGACTTGGAGTACATTTAGCTGCTGGAGCCCATGACATTCTGCTCCAAGCAGAATATATTGTTGGAAGCATACCTACTGCTGCAATGTCGCCGTCAACAGATAAATTAAAAACAGATGTTCGATTAAATCAGCCTCAAGATGCCCGCCATGGTATCAAACAGGCTTATGAGAGCCTTAGTGATGGCCTGGGAAAATCTGCTGCTGTGTTAGTTCAGAGCCCCTTGAAAAAATATCAACGTGGCTCAGGTGCAGGGCCTGCCCTGGCAGCTGCTATTCGAGCCATTCCTGAAGCTGCCATAGGTCCTGCTTCTGCTTGTGCAAGTGCTGTACATTATGCACTTCTTGGTATCAGAAATAGTCTTGATCCTGAACGTAAAAGGGAGTCGATGGAGAAATATTGTCCAACACAACCCTGGGAAGAAGACTGA 7194 0.4158 MLFTEQERSKQDYPMNPSFIKLMMAAHIVQGFSLGLPKRFCEEHLPKEDTIMIVLEDENGREWETRHVAEKMGLSGGWRGFSMDHSFTVGDVLVFHLIQPSKFMGKRIGGPQKVANKNSERSVRSKRSTPDPQSPALQRATEIQAKLSNEHPSFIKTMLHSHGVPKPFCDLHMPKEDTMFLLEDEDGEEFLTKYLDRKMGLSDVAQQNDPSSSRMICDSTAPSADQPEDTSNDPEENSGLQVLNGRSMTTCQQVTSVDTFSIVVDGLVLDSLLPQPLRMKYYDLCCSQQSFLHEHILAGQNCELVLGMIRETINIADAIRGCKITTPSHSFDLWFRKLKALEIWGMNVNFLLVRLQQLRGLASKTEEYREARRAREQAQEQKKGLQLRLKEVKETIRRLDGQDGNLEIRAKWVHEVVTKLSAIIIATMSPWNLAKSAAEAMFSRWAMKRVFKFLLKKKLGQVILGDIDLNQLDVQLTGGTIQLSDLALNVDYINKKFTKATSLIVKEGSIRYLLIQMPWSGKGCQAEVNGLELVISPSTDNIPTGDETCVVGNNDNGNLEYGSTRTDQDMIIDVPKSSSMDVHEGVQTIAKMVKGFLTSFHVKIANVIVAYDPSLDEGDKKKDCHRILVLCISEIECGTCLSEDADSNADVLGISRLTSFVRFQGAMFELLQIDEDDNCASSSCELGARCGEPHLGPTKATCPVVTGKKEGFGGEVKLNIHWKSGSLDIRKVDAVVSVDPIVLRFQLSTIKWFLCAWESYNNLQKDGQVCTNQNSRGSAQLKTTLLCHSSNSVSVGSADYHSFLDGSSNLTSLEPPTEPLVPESRFISNWVPLSADINHKDVIREIDFGASVDQFFECLDGMRSSQSALGSSGMWNWTCSVFSAITAASTLASGSLHTTSEKQHVETNFRATFAGISVLLSFSDEEQGYCYGPNTDNVGGLQINYLVADSNEILLSLQVCPQATIVEGMMKNMEIATFLNSGIDAIDSGVHGYNNAKNQNALVQHLQAEVLRALPSSVSCDLGPDSDSLFGLVATDLPLGNNDSLFKVTLFKTSGVTNCKFTLQSSSDGSLTGPLSFSLSLPPFTFWVVFSVISVFTNLLKNVEQSVEVFNKANKDVYKASDKKEGSGSCVTSLCTTERLRGDISISGARVILCFPSERGRDHACFFSWEQFIALDFTSPSPLKKSFASDCIPTSNASSKRRFPSADAKSLQLSFSDLCMYLITSTSNDCSRISSCSLQNEKFSASCLLSVDSRPGCYSVINVVWQEGLVTGPWMTKKARLLANSDQFRSRDDFVGRGYEFASASTVKDLEELKSQTQQEMILSSSFFIHVHLPQVMVNLSDSQYKDMYCLVYQMLNELVCVTSQSVTDENESFGSQSSVFVECDSLEIVITGETSESIRSSLQSELPGSWDQLKLKVQNFDLLSVTNTGGVRGAEFFRLTHGEGKLWGSISSAPDHEFLLITCDNSSMKRGDGGGSNPLSSRHAGSDIIHLSDPEISHVSTSITVACSTVVAVGGRLDWFSAISSFFSFPSSDTKESGGDTVLDDVKGYCRTDFVLNLIDIALSYEPYAINPGVQSEGKDSESDFFYSNQDTGEHCASCLLAASLLTLSTTALGDSVENSYRITVQDLGLHVVSGTNTLCGTYSVEHLQKVGFIKVAQEAFMDANFKTNCTSGILWVVELSNSHIHVETCHDTTASLIRLGTQLQQLFSPDVEESIVHLQNRWDNVQQAKLRNDLNYETNNPSCDTLATNSQQCPSQAFLEDGSRMAGLMDEICDDAFQGNDNNTWQLCSSGAGIYMPLDGIFIDDMDKMNTDEPEVLSHKGSLSESMPLIGTEGNHALFLQEDFFPEIIEEYCFSDLCPLSEISMGIHSEELHRYNQSNVEGREIERGSGGWYQGNSLKVVENHISEKNEQTELKHSADGILPSNDNSSQNKACGCVILKKIDLRWKIYGGSDWPMENEQHSGRDTAVCLEFALSGMKFQYDIFPVGGVSLSKMSVSVQDFNLCDTSRDAAWKLVLGYYHSKGRPRESSSKAFRLDLEAVRPDPLTPLEEYRLHLALLPIKLHLHQSQLDFLLGFFWSKSSSPDQSPDHHQDVEGSQFLPEGRKNLVHTSIACEALLPYFQKLDIRPILVRVDYSPHHVDLAALRCGKYVELVNLVPWKGVELNLKHVHAAGIYGWGSVCETIIGEWLEDISHNQIHKILQGLPAVRSLIAVGDGAAKLVSSPLENYKKERRVLKGMQRGTIAFLRSISLEAVGLGVHLAAGAHDILLQAEYIVGSIPTAAMSPSTDKLKTDVRLNQPQDARHGIKQAYESLSDGLGKSAAVLVQSPLKKYQRGSGAGPALAAAIRAIPEAAIGPASACASAVHYALLGIRNSLDPERKRESMEKYCPTQPWEED 2397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0215 2397 MobiDBLite consensus disorder prediction 202 241 - -
Lele35g0215 2397 CDD B3_DNA 17 104 IPR003340 GO:0003677
Lele35g0215 2397 Pfam Autophagy-related protein 2 CAD motif 1643 1712 IPR026885 -
Lele35g0215 2397 Pfam N-terminal region of Chorein or VPS13 447 541 IPR026854 -
Lele35g0215 2397 ProSiteProfiles B3 DNA-binding domain profile. 19 111 IPR003340 GO:0003677
Lele35g0215 2397 MobiDBLite consensus disorder prediction 107 138 - -
Lele35g0215 2397 Coils Coil 361 402 - -
Lele35g0215 2397 MobiDBLite consensus disorder prediction 204 241 - -
Lele35g0215 2397 SUPERFAMILY DNA-binding pseudobarrel domain 15 103 IPR015300 -
Lele35g0215 2397 Pfam Autophagy-related protein C terminal domain 2296 2388 IPR015412 -
Lele35g0215 2397 Pfam B3 DNA binding domain 19 103 IPR003340 GO:0003677
Lele35g0215 2397 PANTHER AUTOPHAGY-RELATED 2, ISOFORM A 441 2388 IPR026849 GO:0006914
Lele35g0215 2397 SMART B3_2 19 111 IPR003340 GO:0003677
Lele35g0215 2397 Gene3D - 4 106 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0215 Lele-ChrLele35 1328800 1347035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0215 128 202 B3 DNA Binding Superfamily AT3G19184 43.902 2.72e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele35g0215 ATG_C 1.4e-22 No_clan