Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0196 ATGGGCTCGCTTCCTCCACCCCAACTGAGCTTGGATTTGACACCCACTTTTGTTCCCAAGACAATCACTGATTTCCTCTACGAAGTTTCCACGATCGCCAATGCGCCCGTTAAGCTCTCCCGGGTCGATGATTTCATCCGGAGATTGGAAGAGGAAATGAGGAAGATTGACGCCTTTAGGCGTGAGCTTCCTCTCTGTATGCTCCTCTTGAATGATGCAATCTTAGTTCTGAAGGAGGAATCGGCAAAATTCAGGATACCTGATTCTCAGCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAGAAGGAGGAAATTGAAACAGAGAAGGAATGCCGAGATAAGAAGAATTGGATGAGTTCTGTACAACTCTGGAACACTGATAGTTATCCCGCCTGTGAGCAAAAAGAACATTATAAATTAGAGAACAAGAAAAATGAAGAACAATCTGTGGCAGAGGATCCTTTCAAATCTTGTAGAAATAAAATTGGAAGGAGGGTTTTTATGCCTTTTACAACATACAGTCCAGTTCATATGACAAGTTTGGGAACCAAGGAAGAAAAGGAAGAGTCTGATATTAATGGACTTTCTCTTGTGACTCCTGGAGTTAAAAATCTGAGGGAGGGGTCTATTTCTAGCGGATCAGGAATATCATCTGGCAGGGCGGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGCACTGGACCGCAGCAGACTGCTCGGAAACAAAGAAGGTGTTGGTCACCAGAGCTGCATCGTCGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACCCGAAGACTTCCAGCTTCTACAGCTACACCCGGTAACCAGTCTGTTGTAGTTCTTGGGGGTTTATGGCTGACCCAAGATCAGTATAATGACTCCTCCAAGGGTAGCGTTTCAGGTTCTGGATCTCCTCAAGGTCCCCTCCAGTTAGCCTCAGGATCCGGAGGAGGAATGTCCCAAACTGAAGATGACATCATGGAAGATGATGATGATGATGAAAAATCCAGAGACCGATGGATGGAACAGTCAAATCCATAA 1161 0.4505 MGSLPPPQLSLDLTPTFVPKTITDFLYEVSTIANAPVKLSRVDDFIRRLEEEMRKIDAFRRELPLCMLLLNDAILVLKEESAKFRIPDSQPVLEEFIPLRKECDQKEEIETEKECRDKKNWMSSVQLWNTDSYPACEQKEHYKLENKKNEEQSVAEDPFKSCRNKIGRRVFMPFTTYSPVHMTSLGTKEEKEESDINGLSLVTPGVKNLREGSISSGSGISSGRAVSSPPCSDQPSLRTGPQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTATPGNQSVVVLGGLWLTQDQYNDSSKGSVSGSGSPQGPLQLASGSGGGMSQTEDDIMEDDDDDEKSRDRWMEQSNP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0196 386 MobiDBLite consensus disorder prediction 210 249 - -
Lele35g0196 386 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Lele35g0196 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 377 IPR044787 GO:0003700|GO:0006355
Lele35g0196 386 Gene3D - 246 304 - -
Lele35g0196 386 SUPERFAMILY Homeodomain-like 244 305 IPR009057 -
Lele35g0196 386 Coils Coil 42 62 - -
Lele35g0196 386 MobiDBLite consensus disorder prediction 332 386 - -
Lele35g0196 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Lele35g0196 386 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
Lele35g0196 386 MobiDBLite consensus disorder prediction 210 250 - -
Lele35g0196 386 MobiDBLite consensus disorder prediction 332 360 - -
Lele35g0196 386 FunFam Myb family transcription factor 246 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0196 Lele-ChrLele35 1230045 1232064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0196 41 326 G2-like Transcription Factor Family AT2G03500 41.311 1.97e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele35g0196 Myb_DNA-binding 6.2e-07 CL0123