Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0182 ATGCCGCGACCTTGCTTTCACAAGCTTATTTGTCCCTCCACGCTCCAATCCCGGCAGCTGACTATTCCAGATAATTTTCTGAGAAAATTTGGGGGTGATCTTTCTACAGTTGCTACCCTCACTGTCCCCGATGGCAGTGTTTGGCAAGTAGGATTGAAAAAGTTGGGCAACAAATCTTGGCTCCTTGATGGCTGGCAGGAATTTATTCAACGCTACTCCATTGGTGTTGGTTACTTGCTGATATTCAGATATGAAGGCAAATCATCATTCAATGTTCATATTTTCAATTTGGCTACTTGTGAGATAAATTACCAATCAAACACACGAAGTAATGAAGGGACTTTCTTTCCAAATCAACATCTTAATTTTTATGATCTTGAAGATGAAGAAGACTCCATTGAATTCTTAGATTCATCACCTTCATCCGTTACTCCTGGTGCATTGCAGAACAAGGCTTTTCCTGGAACTCCAGCATTGCAGAATTTGTTCCATGGGTCTAAGCTTAACTCCATAAACTGGGGAGATGGGGGGCATTCCCTTTCTCCCAAGGTTGCCAATTCTCAAGACAATCAATCAAGCAGAAATATAGGTGTTCAGTTTAATGCAGTTGAGTTCAAAAAGTCTACTGAAGAGCTAAGATTGCGTTTTTCTAATGGGGAAATGCAATCAGTTAAGAAAACCATAAGAAAGAAGCGGAAAATGGATTCTAGTGGACAAGAACCCTCTGCTCAATATGAAGAAGAGGGGGAAATGCGCTATAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACTGTGACAGCTGAAGAAAGAGAGAGAGCAGTCAATTCAGCAAAAGCATTTGAACCGGCTAATCCTTTCTGTCGAGTTGTCCTGCGACCCTCCTATTTATATAGGGGATGCATAATGTATTTGCCATCCTGTTTTGCAGAAAAGCATTTGAATGGGGTTTCAGGATTCATTAAACTCCAGATCTCTTCTGATGGAAAACAGTGGCCTGTTCGCTGCCTTTACAGAGGAGGGAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTTTCACTGGAAAATAATTTAGGCGAAGGGGATGTCTGTGTTTTTGAACTTCTTGGAATGAAGGAGGTAGTGTTGAAAGTTACTATATTTCGTGTCACTGAGGATGCAGGATTGATGAGTCCTCCTATGCATCATCAACACCAAAACGTCAGCCCAAGTAAACTGTTGAATACTCCTATGCCACTAGCCATCATGCCACCGAAACTGATTAGAAACTAG 1272 0.4135 MPRPCFHKLICPSTLQSRQLTIPDNFLRKFGGDLSTVATLTVPDGSVWQVGLKKLGNKSWLLDGWQEFIQRYSIGVGYLLIFRYEGKSSFNVHIFNLATCEINYQSNTRSNEGTFFPNQHLNFYDLEDEEDSIEFLDSSPSSVTPGALQNKAFPGTPALQNLFHGSKLNSINWGDGGHSLSPKVANSQDNQSSRNIGVQFNAVEFKKSTEELRLRFSNGEMQSVKKTIRKKRKMDSSGQEPSAQYEEEGEMRYRFYESASARKRTVTAEERERAVNSAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISSDGKQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLGMKEVVLKVTIFRVTEDAGLMSPPMHHQHQNVSPSKLLNTPMPLAIMPPKLIRN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0182 423 Gene3D - 265 386 IPR015300 -
Lele35g0182 423 SMART B3_2 6 98 IPR003340 GO:0003677
Lele35g0182 423 SMART B3_2 288 384 IPR003340 GO:0003677
Lele35g0182 423 Gene3D - 1 100 IPR015300 -
Lele35g0182 423 SUPERFAMILY DNA-binding pseudobarrel domain 281 383 IPR015300 -
Lele35g0182 423 SUPERFAMILY DNA-binding pseudobarrel domain 3 100 IPR015300 -
Lele35g0182 423 Pfam B3 DNA binding domain 7 95 IPR003340 GO:0003677
Lele35g0182 423 Pfam B3 DNA binding domain 291 383 IPR003340 GO:0003677
Lele35g0182 423 ProSiteProfiles B3 DNA-binding domain profile. 288 384 IPR003340 GO:0003677
Lele35g0182 423 CDD B3_DNA 286 382 IPR003340 GO:0003677
Lele35g0182 423 PANTHER B3 DOMAIN-CONTAINING 3 373 - -
Lele35g0182 423 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Lele35g0182 423 CDD B3_DNA 4 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0182 Lele-ChrLele35 1110446 1113079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0182 1 388 B3 DNA Binding Superfamily AT3G18990 51.407 3.73e-127 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele35g0182 B3 1.6e-15 CL0405