Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0181 ATGAGAAACTGTGCCAAGGTGCTGCTATTTCTGTTTCATATCATAATGATCTTGGCTTTGGTTCACTCAGTTTACATTACGAAGTCAGACTTTTCAAGGATTAATAGCCACGCAGCACAGTTTGTAGCACAGATATGGGTTGGTGATGAGTTCCTCACCTTCTTCCATTACCATATATACGATCGTCTCTCTCTTCTTTTCTGTTTCTCTTCAACCTTCATCAGCCATTATATCATTTCTGAAGCTCAAGACTCACTTCTCAAATACCATTCCATAAAGGCACAAGAAGAAGACGCCGATCGACCACCTTCGAAGGGCTCCGACCTACACTCAGGTACGATATACTGTAAACGTATCCCGAATGCTTTCATCAGATGTTTACGTGGGAGAGTGTTAAAGGAAGCCATCCTCAAGGATCGTAGTGGCAAGAGTTGGCATGTCAACATCAGCAACATTAATGGTGACATGTATTTTGGTAATGGTAGGGAGAAGTTCACGAAGGACAATTCATTAGAGGCTGGATACTTTGTTATCTTTTCATTTGATGGAACTAACACATTCAACTTCAAAATCTACAACACAAATCGTTGTGAAATGATCGAGCAGCCCAAAGAGGAGGAAGAAGATAAAGAAAAGAATTCTGCAGAGGAAGTAAAGGAGGAAGATGATGATGATGAAGAGAAGGATGAACAAGTCAACAAAAGAAGTAGGAAGGGAAAAAGCATGAGAGCTTCTTCTTCTTCTAAGGCTAAAAGAAAAATTAGCATCGAAGATTATGGAATTGATGCAGAGATGTATGTTAAGCCAGACAATCCCTACTTCGCAATAAAAATAGGAGGAAACAGGAAAAACGCGCTGCTCTTGAAGGAGGCAGAAGAAGAATTTGGCTTTGATACCATGTTAGGATACACCCAAAATGGTGAAGATGGTGCAAGTGATGATGACAAGATAACTTTATCAACTGATATGCTAGAGTATGATTCTTATGGTTATGATTATGAATCAGATGACATGGATATAGAGCAGTATGATGAAGATGATTATGAAGATGGTGAGGTTCTGGAGCCAGTAAAGCACTCTGTAGCAGAAGACTCCATTTGCGAGGTAAGAGAAGTAGGTGGTGTTGTTTCTAGCAATTATGACAGCAAACAGATTAAGAAAGAAGTCATAAGTGTTGATTGCCCCGCATCTCATCTTGAAGAGAATGACAATAGAAATGTTAATTACGATGAAATAAATTGTGTCAACGATGGTATTGACACTGAATCAATGGATAACTCTGATAACGTCACTGACAAAAATATGTGTCTACAAGAGTCATGGGAAGCTGAAAAGCCAATTGCTGGCTCGCAAATAAGGTTGTTAGATCTTTCTGAGAGGCAGAAAGTCTGCAATGCCACAGAGACTGAATTATCATCTGACCAAGGCAACAATGAAAGGAATGAAGTAGATGCTGCTCAGTGTGCTGATGACGTTGTTAAGAACCTGGACATAGTTAGAGAAACTGACTCAGAAATGTCAAAAATGGAAGTATCTGTAAATATTGATGATGCGAACAAGGATGCTAGTAATGATGGTATTGATTCGGTTTTGTTGAAGTTCTTGAAGGCCAAAGATTTATGCATTTCTGATGCCTTTGAGGTGCTACAGAAGACCATGATATGGCGAAAGGAAAACAACATTGACACAATCCTCGACAAGGATTTGGATTCTGGGTACAGAAAATCTATGTACATAAACAGCAGGGACAGAGAGGGTCGTCCCGTTTGTTGCCTCGTTTATGGGGTTTTCAAGAACAAGGAGCTGTACAAGAATACCTTCAGACCTTGA 1830 0.3978 MRNCAKVLLFLFHIIMILALVHSVYITKSDFSRINSHAAQFVAQIWVGDEFLTFFHYHIYDRLSLLFCFSSTFISHYIISEAQDSLLKYHSIKAQEEDADRPPSKGSDLHSGTIYCKRIPNAFIRCLRGRVLKEAILKDRSGKSWHVNISNINGDMYFGNGREKFTKDNSLEAGYFVIFSFDGTNTFNFKIYNTNRCEMIEQPKEEEEDKEKNSAEEVKEEDDDDEEKDEQVNKRSRKGKSMRASSSSKAKRKISIEDYGIDAEMYVKPDNPYFAIKIGGNRKNALLLKEAEEEFGFDTMLGYTQNGEDGASDDDKITLSTDMLEYDSYGYDYESDDMDIEQYDEDDYEDGEVLEPVKHSVAEDSICEVREVGGVVSSNYDSKQIKKEVISVDCPASHLEENDNRNVNYDEINCVNDGIDTESMDNSDNVTDKNMCLQESWEAEKPIAGSQIRLLDLSERQKVCNATETELSSDQGNNERNEVDAAQCADDVVKNLDIVRETDSEMSKMEVSVNIDDANKDASNDGIDSVLLKFLKAKDLCISDAFEVLQKTMIWRKENNIDTILDKDLDSGYRKSMYINSRDREGRPVCCLVYGVFKNKELYKNTFRP 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0181 609 Gene3D - 106 197 IPR015300 -
Lele35g0181 609 Pfam B3 DNA binding domain 117 193 IPR003340 GO:0003677
Lele35g0181 609 Gene3D - 499 608 IPR036865 -
Lele35g0181 609 PANTHER PATELLIN-1 203 607 IPR044834 GO:0008289
Lele35g0181 609 ProSiteProfiles B3 DNA-binding domain profile. 119 195 IPR003340 GO:0003677
Lele35g0181 609 SUPERFAMILY CRAL/TRIO N-terminal domain 528 567 IPR036273 -
Lele35g0181 609 SUPERFAMILY DNA-binding pseudobarrel domain 113 199 IPR015300 -
Lele35g0181 609 MobiDBLite consensus disorder prediction 201 249 - -
Lele35g0181 609 MobiDBLite consensus disorder prediction 201 217 - -
Lele35g0181 609 SMART B3_2 99 195 IPR003340 GO:0003677
Lele35g0181 609 CDD B3_DNA 105 193 IPR003340 GO:0003677
Lele35g0181 609 Coils Coil 204 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0181 Lele-ChrLele35 1104906 1110257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0181 119 229 REM Transcription Factor Family AT3G06220 30.081 1.70e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele35g0181 B3 3.8e-12 CL0405