Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0171 ATGGAGGACCATCAGAGCAGCGACGAAGATTACCAACACTCCGATCAGGGGTCCGTGGACGACCTTGAAAATGCGGAGGACCCCGATTCTAAGCTGGTCGCCGGCACTTCCAAGGGTCCCACAGTTATGGTGATTAGAAAGGAAACACTTGTAACGGCACAGGAAGAGGATTTAAGCAGAATAATGGCATTGCTATCAGTGAAAGAAAAGCATCAGGCACGTATGCTTCTTATTTTTCATAGGTGGGATATGGAGAATTTATCTGCGAAGTTTGTGGAAAAGGGGAAACCATTACTCTATGCTGAAGCTGGTGTTAGTGAAGAAGAACACCGGGATTCATCAGGTGCTTCTTCAATGTTATGTGGAAACTGCCATGAGAATGTTCCCTGTGATCAAGCAACAAGAATGGACTGTGGTCACTGTTTTTGCAACGACTGTTGGAGAGAACATTTCATTGTCAAGATAAATGAAGGTCAAAGTAAACACATAAGATGCATGGAACACAAATGCAATTATTATTGCAATGAGGATGTTGTAAGGAAACTAGTGAGCGAAGAGAGCAGCGAGATGGCAGAGAAATTCGAACGTTTTCTTCTTGAATCCTACATTGAAGACAATAAAAGAGCAAAGTGGTGCCCCAGCACTCCTCACTGTGGGAATGCAATCTATGTTGAGGATGATAATGATACATTATGTGAGGTGGAATGTTCATGTGGTTTTCAATTCTGTTTTAGTTGTCTGTCAGAACCACATTCCCCTTGTTCATGTTTGATGAGGGAACTTTGGGTTGAAAAGTGTGTTGGTGAATATGATGCCGCTTGGATAAAAAATGACACAAGACCTTGTCCAAAATGCAACATATTTGAGAAAATGATCGGTGGTTGTAACACGGTTACATGTATTTTTGGCCAAACATTTTGTTGGCTGGGTGCCAGAGCCAAAACAGCTATGGAGGCGAAGCGGGAAGAAAGCCATCATGGGCACTATTATGATCGTTATAAAGCTCATATGGAGTCCTTAGATAAAGAAAGGAAATTGAGAGAATCTATAGTAAAGAAGGTGATGGACTATTCTATTTCTACCCACGGAGACTATCGCTGGCTCAATGATGGAGTCTCCACACTTGTGAGGTCTAGGCGAGTCCTATCATATTCATATCCGTTTGAACTCTATATGTTTGAAGAGGAGCTATTCAAACATGAAATCTCGAACGAGGAAAGGGAAATAAAATACAGCTTATTCAAGGATCATCAGGAGCAGCTTGAGGCAAAAGTTGAGAAGCTCTCTGAAATTTTGAAAATGTCCTTTGAAAGCAGTAACGAGGTTTCGGATTATATAAGGATGAAGGTTATCAATTTGTCAGCAGTTATTAACAAGTTTTGTGAGGGAATGTATGAGTTCATCCAGAATGACTTGTTGGGTTCTCTCTCACATGGCACTCATCACAGGATAGCCCCATACAAGTTATCGAAGCAACAGTGA 1482 0.4157 MEDHQSSDEDYQHSDQGSVDDLENAEDPDSKLVAGTSKGPTVMVIRKETLVTAQEEDLSRIMALLSVKEKHQARMLLIFHRWDMENLSAKFVEKGKPLLYAEAGVSEEEHRDSSGASSMLCGNCHENVPCDQATRMDCGHCFCNDCWREHFIVKINEGQSKHIRCMEHKCNYYCNEDVVRKLVSEESSEMAEKFERFLLESYIEDNKRAKWCPSTPHCGNAIYVEDDNDTLCEVECSCGFQFCFSCLSEPHSPCSCLMRELWVEKCVGEYDAAWIKNDTRPCPKCNIFEKMIGGCNTVTCIFGQTFCWLGARAKTAMEAKREESHHGHYYDRYKAHMESLDKERKLRESIVKKVMDYSISTHGDYRWLNDGVSTLVRSRRVLSYSYPFELYMFEEELFKHEISNEEREIKYSLFKDHQEQLEAKVEKLSEILKMSFESSNEVSDYIRMKVINLSAVINKFCEGMYEFIQNDLLGSLSHGTHHRIAPYKLSKQQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0171 493 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 60 368 IPR031127 GO:0004842|GO:0016567
Lele35g0171 493 ProSiteProfiles TRIAD supradomain profile. 117 340 IPR044066 -
Lele35g0171 493 MobiDBLite consensus disorder prediction 1 28 - -
Lele35g0171 493 SUPERFAMILY RING/U-box 192 262 - -
Lele35g0171 493 SMART ibrneu5 192 256 IPR002867 -
Lele35g0171 493 SUPERFAMILY RING/U-box 271 310 - -
Lele35g0171 493 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 206 IPR013083 -
Lele35g0171 493 Gene3D - 314 473 - -
Lele35g0171 493 Gene3D - 252 313 - -
Lele35g0171 493 Pfam IBR domain, a half RING-finger domain 192 256 IPR002867 -
Lele35g0171 493 FunFam RBR-type E3 ubiquitin transferase 115 206 - -
Lele35g0171 493 Pfam Ariadne domain 312 488 IPR045840 -
Lele35g0171 493 MobiDBLite consensus disorder prediction 1 36 - -
Lele35g0171 493 SUPERFAMILY RING/U-box 118 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0171 Lele-ChrLele35 1052485 1054755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0171 62 488 ARIADNE family AT2G16090 54.113 5.31e-157 453