LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele35g0155	ATGGCTTCCAGTTCTGATTCCCCGCCTCCGCCTGATTCATCTTCGTCGGATTCTCCTCCGTCACCGCCACCACCGGATTCAAGTTCATCTGACGATTCTCCGTCGCCACCACAATCCCCTCCTCCATCATCCCCTCCGCCACAATCCCCTCCGCCATTATCGCCGCCACCACCCGACGACCATTCACCCCCACCGCCATCCGACCATGACAATGGTGGAGACAACAATAATGACTCATCTCCTCCCCCTCCTCCACCTTCTAATGGCAACGATGGCGACGGCGGAAATAATAACAAGAGCCCTCCACCTCCACCATCGAATTCCAAGGGAGATCAGTTTTCGCCTCCACCGCCAGTGCACCGTTTGTCTCCACCGGGAAAAAGTTCACACGAATCATCATCATCGAATAATCCATCATCACCGTCAACAGGTAGCAATAACGATGGATCTCAATTGAGCGTACCAGCTATTATTGGTTTGGCTGCTGGAGCTGGCTTGTTGCTTCTTGTGTTCATCATCCTCTTCGTTGTATGCAACAGAAGAAAGAAGAAGAGATCTGAGGGTCCCATTATTTACTACGCCAACAAAAAATACGATGTAGATGATGACTATTACAAGCACGCCAAGAAGGGAAACAATTGGAACAACACTGGATATAACGCGGGTGATCAACACGTTATGAATATGCCAGCACCTCCAGGAGCAGTAGGGAACAAGGCTCCTTGGGGAGCACCACCGGCTCCATTCTCTGGAAATATGAACAGCGGTGAGATGAGCAGCGCGAGCTATTCAGGGCCGGTGGGTCCGATGCAGCCGCCTCCACACCCATCGGTGGCGCTAGGGTTCAACAAGAGCACATTCACGTACGAGGAGCTAGCGGCTGCAACAAATGGGTTCGCCCAAGGGAATCTACTGGGACAAGGTGGGTTCGGGTATGTGCACAAAGGAGTGCTGCCCAACGGGAAGGAAATAGCGGTGAAGAGTCTCAAGTCGACCGGAAACCAAGGTGACAAAGAGTTTCAGGTTGAGGTTGATATCATTAGCCGAGTTCATCATCGCCATCTCGTTTCTCTTGTTGGCTATTGCATTCACGAGGGCCGTAGTCTCTTGGTCTATGAGTTCGTGCCTAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCTGTTATGGATTGGCCTACTAGGCTCAAAATTGCGATTGGATCGGCCAAGGGACTTGCCTACTTGCACGAGGACTGTGAGTATTTGGCTCCTGAGTATGCGTCAAGTGGCAAATTAACAGAGAAGTCTGATGTGTTCTCATTCGGTATTATGCTTCTGGAGCTCATAACAGGGCGACCTCCCGTTGACACTGCCGGAGAATATGAAGAGGACAGTTTAGTTGACTGGGCTAGACCTCTTTGCATAAAGGCGATGGAAAGTGGAAGCTTTGAAGGTCTGAGGGATTCACGACTTGGCAACAACTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGCTGCCAGCGTCAGACACTCCGCAAGAAGGCGACCAAAAATGAGCCAAATAGTACGTGCACTGGAGGGTGACGTGTCACTAGATGATCTGAGCGAGGGGGTGAAGCCAGGGCAGAGTACAATATTCACAACCAACGGCACGGAGTACGATGCAAGCACTTACAGTGCGGACATGAAGAAGTTCAGGAAGCTTGCATTGGATAGCGGCTATGCCAGCAGTGAGTTTGGCCACACTAGCGAGTATGGTCTCAACCCTTCCTCCTCTAGCAGCGAGGCGGGTCACTCTTCTGAATACACCCCCAAGAACACCAAGTAA	1824	0.5126	MASSSDSPPPPDSSSSDSPPSPPPPDSSSSDDSPSPPQSPPPSSPPPQSPPPLSPPPPDDHSPPPPSDHDNGGDNNNDSSPPPPPPSNGNDGDGGNNNKSPPPPPSNSKGDQFSPPPPVHRLSPPGKSSHESSSSNNPSSPSTGSNNDGSQLSVPAIIGLAAGAGLLLLVFIILFVVCNRRKKKRSEGPIIYYANKKYDVDDDYYKHAKKGNNWNNTGYNAGDQHVMNMPAPPGAVGNKAPWGAPPAPFSGNMNSGEMSSASYSGPVGPMQPPPHPSVALGFNKSTFTYEELAAATNGFAQGNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGNQGDKEFQVEVDIISRVHHRHLVSLVGYCIHEGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCEYLAPEYASSGKLTEKSDVFSFGIMLLELITGRPPVDTAGEYEEDSLVDWARPLCIKAMESGSFEGLRDSRLGNNYDMQEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSTIFTTNGTEYDASTYSADMKKFRKLALDSGYASSEFGHTSEYGLNPSSSSSEAGHSSEYTPKNTK	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele35g0155	607	ProSitePatterns	Protein kinases ATP-binding region signature.	305	327	IPR017441	GO:0005524
	Lele35g0155	607	MobiDBLite	consensus disorder prediction	1	148	-	-
	Lele35g0155	607	Gene3D	Transferase(Phosphotransferase) domain 1	376	415	-	-
	Lele35g0155	607	SUPERFAMILY	Protein kinase-like (PK-like)	278	524	IPR011009	-
	Lele35g0155	607	Gene3D	Transferase(Phosphotransferase) domain 1	416	534	-	-
	Lele35g0155	607	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	163	416	-	-
	Lele35g0155	607	Gene3D	Phosphorylase Kinase; domain 1	276	374	-	-
	Lele35g0155	607	Pfam	Protein tyrosine and serine/threonine kinase	416	522	IPR001245	GO:0004672\|GO:0006468
	Lele35g0155	607	Pfam	Protein tyrosine and serine/threonine kinase	302	413	IPR001245	GO:0004672\|GO:0006468
	Lele35g0155	607	MobiDBLite	consensus disorder prediction	126	148	-	-
	Lele35g0155	607	ProSiteProfiles	Protein kinase domain profile.	299	607	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele35g0155	607	MobiDBLite	consensus disorder prediction	12	62	-	-
	Lele35g0155	607	MobiDBLite	consensus disorder prediction	98	123	-	-
	Lele35g0155	607	FunFam	Proline-rich receptor-like protein kinase PERK8	273	374	-	-
	Lele35g0155	607	MobiDBLite	consensus disorder prediction	579	607	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele35g0155	Lele-ChrLele35	937977	941685	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele35g0155	132	607	Trihelix Transcription Factor Family	AT1G70460	41.143	2.52e-112	350

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Lele35g0155		PK_Tyr_Ser-Thr	1.5e-18	CL0016