Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0140 ATGTTGCGCTGTCTCAACTCCTCCGGCAATTTCACCGGAAACTGCTCCGACATGACGGTGTTGGAAAGGCAAAGGATGAGGATGAAATGGCAACAAGAGCAACAACAAGATCACCAAAACCAGAGCTTTTATGGTGATTCTGCGCTCGGCGAGGTCGTCGCTAAGTCCATCAAGCCCGAGCTCGGCCAGCTCCACTTTCCCAGTTTCGGGTTCGGGTCGCCTGGCTTTGAAGCCAGTTCTGCAATTTCAACGACTTGCATGGCAGCAGCTGGAGAACCCAGAGGCAAAGACTCTGTTTCAGACAAGGAGAAGATGAGCTCTGCATGTGGGAAACACAGCTTCAAGAAGAGAAAATCCGACAAGGGTCATAGCTCCAAGGTTGTTGCAGAGAGTGAAAACAAAGAGAAGAAGATGAAAGCAAGTGGAGAAGAAGGAGAATCGAAAATAACAGAGCAAAATAGCAGCAAGAATACAACAACCAACAACGTTAACAGCAGCAAAGAAACATGTGGAGGAACCTCAAAGGGAAATTCGAAGGTGTCGGAGGTTCAAAAGACAGATTACATCCAAGTCCGAGCTCGTCGTGGCCAAGCCACTGACAGCCATAGCCTAGCAGAAAGAGTTAGAAGAGAAAGGATCAGTGAGAGAATGAAGTATTTGCAGGATTTAGTACCAGGTTGTAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAGATCATCAACTATGTTCAATCTCTTCAACGCCAAGTAGAGTTCTTGTCCATGAAATTAGCTGCTGTAAACCCAGCACTTGACTTCAACTTTGATGATCTCTTCTCCCAAGAGGTTTTTAGTACTTGTGGTGGTCCAAGTTTTGCAACATTTGGGATGGGATCAGACATGAACAATCATCCATCAGCATATGTTCAGTTCAACAACAACTCAGGGCAACAACAACAGTTTCCTCCTCCTTCAATCCCCGAAACGTTTCTTGAATCCTGCTGTTTCCCTCATATTCTACCATCTTCTACTTACGAATCTGATCTTCATAATCTAATCAATGTGGGTTTTGATCAACAACGAGCAGCAGCAGCATCCTTTCTTTCTCAGCCATTCACAGGTGCAGTTGAAGCTAGCAATCCAAAGATGGAGATGTAG 1140 0.4518 MLRCLNSSGNFTGNCSDMTVLERQRMRMKWQQEQQQDHQNQSFYGDSALGEVVAKSIKPELGQLHFPSFGFGSPGFEASSAISTTCMAAAGEPRGKDSVSDKEKMSSACGKHSFKKRKSDKGHSSKVVAESENKEKKMKASGEEGESKITEQNSSKNTTTNNVNSSKETCGGTSKGNSKVSEVQKTDYIQVRARRGQATDSHSLAERVRRERISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPALDFNFDDLFSQEVFSTCGGPSFATFGMGSDMNNHPSAYVQFNNNSGQQQQFPPPSIPETFLESCCFPHILPSSTYESDLHNLINVGFDQQRAAAASFLSQPFTGAVEASNPKMEM 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0140 379 SMART finulus 203 253 IPR011598 GO:0046983
Lele35g0140 379 Pfam Helix-loop-helix DNA-binding domain 201 248 IPR011598 GO:0046983
Lele35g0140 379 FunFam Basic helix-loop-helix transcription factor 194 266 - -
Lele35g0140 379 MobiDBLite consensus disorder prediction 95 110 - -
Lele35g0140 379 MobiDBLite consensus disorder prediction 151 182 - -
Lele35g0140 379 Gene3D - 194 266 IPR036638 GO:0046983
Lele35g0140 379 MobiDBLite consensus disorder prediction 123 150 - -
Lele35g0140 379 MobiDBLite consensus disorder prediction 91 182 - -
Lele35g0140 379 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 247 IPR011598 GO:0046983
Lele35g0140 379 CDD bHLH_AtBPE_like 187 272 - -
Lele35g0140 379 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 100 307 IPR024097 GO:0006355
Lele35g0140 379 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 265 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0140 Lele-ChrLele35 847288 849338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0140 9 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 41.341 7.86e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele35g0140 HLH 1.8e-06 No_clan