Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0110 ATGGTCTTTAGCCTTTACCTTGATTTTCACAGCATCCAAGTGACAAAGTTCAGTTATGATGGCAACAACTTTTGCTTTAGTGCATTCTGTGCATGTTTGGATCAGCTTACAGCTTTTACTTCCATAAGGCATCAAGAAAAGGGTTTTGACAATATGGCAACTTATTTGCCAAATTCATATTCCGACACACCGATTACCTCTAGTAATATAACCTTGTATATGAACTCTGGTTCGTATCCCGATGCATTCTCTGGAAATTCTCAGGAGCAAAATGGCTGCTTTGTGATTCCACCAATGAGTTTGTCACAATCAGCCCCAGAACAGCAAGAAATCTTAGCAAATCTTCGTGGGTTACAAACTGGGGACTATGATTTCACTGCATGGAGACAAGGGAGAAATGAGATGCTAGTAACACATCCAATGCATGGAAATAACTTGCAGAGCCAGGGATTATCTCTCAGCCTTGGAACCCAAACACCATCAGGAATCCAAGTGTCTCCTTTCCATGATCAAAGTTCTAACCCGAGTTTCGATTCGTTTTTAGGTCAAAATCCATCGATTTCGGGCCATAAAAGCAGCTCATCTAGGCATGAGTGTATGAGGCACAGTGAAAATTTGCCTTCTGATTTACCTGAAGCTAGTCAAGTTTTGAATAGAGGGGATTATTCTTTGCATGGGATGCCAAATGTTTCAAGAACAATTCCAAATTCCAAGTACCTCAAGGCGGCACAAGAGCTACTTGATGAAGTTGTTGACATCCAAAAAGCAATGAAACAACCCAATGTGAAAAGTCCGAGCACACGCGAGAAGAAGACTTCTAAGGAGAATGATGGAAGACTAGAAAATGAAAGGCCACCTGCTAATGGAGAGCCTAACCCTCAAGATTTAGAGGGCAACACCTCTTGTGAGCTTTCGCATGCTGAAAAACAAGATCTGCAGAACAAGTTAACAAAGCTACTGTCAATGCTGGATGAGGTTCACAGTAGGTACAAACAATATTATCATCAGATGCAGATTGTGGTATCGTCATTTGATGTGATAGCAGGACGTGGGGCAGCTAAACCATACACGGCTCTAGCTCTACAAACCATTTCGCGCCATTTCCGGTGCTTGCACGATGCAATCACTGGCCAGATCAGTGCAACACAGAAGTGCCTTGGAGAGCAAGATTCTGCAGGAAATAATAAAGGAGTTGGAATATCAAGACTCCGGTATGTTGACCAACAACTCCAGCAACAGAGGGCTCTTCAGCAGCTTGGAGTGATGCATCATGCATGGAGGCCACAAAGGGGACTACCAGAAGGCTCTGTTTCAATTCTTCGCGCTTGGCTTTTCGAACATTTCCTTCATCCCTATCCCAAAGATTCTGAAAAGGCAATGCTAGCAAGGCAGACAGGTTTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAGGAGATGTACAAGGAAGAAATTGCAGATGCCGACTTGCACTCCAGTTCTTCAACTGAAGATGCATCCAAGGTAAGCAAAAGCGATGTCAAACTTTCCGATGATGGGTGTGATGATTTACAACAGAACCAGAGTTCAATGGCAGCCGACAAGGCTAAGGACTTGAGATCTGATAAGCAAACTGAGGAGCAACAGCAAAGGCTCTGCTTTGATGACTGTAGTGTCTTCCAAGATGGCACAGCTGTCCAGACTAATGAAGGCGGTTCGGGGTTTGTAGCGGTTGCTCCGGCATGCCATATGTCCGAGTTGGGGAGGTTTCAGCCTGGAAACGGCGGTGTGTCGCTGACATTAGGTTTGCAGCATTGTGAAGTTGGTGATTTTATGTCCGGCGATATCCGTCATAGCTTCGTCGTCATGAGGGAGGATGGTATTTACAATGCAGCATCAGCTGCTACCATTGGAGTTCAGACATCAGAACTTGATTATGTAGCTGCTGGAAACCAGCACCAAAGATTCACTTCGCCCCATTAA 1995 0.4426 MVFSLYLDFHSIQVTKFSYDGNNFCFSAFCACLDQLTAFTSIRHQEKGFDNMATYLPNSYSDTPITSSNITLYMNSGSYPDAFSGNSQEQNGCFVIPPMSLSQSAPEQQEILANLRGLQTGDYDFTAWRQGRNEMLVTHPMHGNNLQSQGLSLSLGTQTPSGIQVSPFHDQSSNPSFDSFLGQNPSISGHKSSSSRHECMRHSENLPSDLPEASQVLNRGDYSLHGMPNVSRTIPNSKYLKAAQELLDEVVDIQKAMKQPNVKSPSTREKKTSKENDGRLENERPPANGEPNPQDLEGNTSCELSHAEKQDLQNKLTKLLSMLDEVHSRYKQYYHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKCLGEQDSAGNNKGVGISRLRYVDQQLQQQRALQQLGVMHHAWRPQRGLPEGSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIADADLHSSSSTEDASKVSKSDVKLSDDGCDDLQQNQSSMAADKAKDLRSDKQTEEQQQRLCFDDCSVFQDGTAVQTNEGGSGFVAVAPACHMSELGRFQPGNGGVSLTLGLQHCEVGDFMSGDIRHSFVVMREDGIYNAASAATIGVQTSELDYVAAGNQHQRFTSPH 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0110 664 Pfam Homeobox KN domain 443 482 IPR008422 GO:0003677|GO:0006355
Lele35g0110 664 Pfam Associated with HOX 234 376 IPR006563 -
Lele35g0110 664 MobiDBLite consensus disorder prediction 185 211 - -
Lele35g0110 664 ProSiteProfiles 'Homeobox' domain profile. 423 486 IPR001356 GO:0003677
Lele35g0110 664 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 167 511 - -
Lele35g0110 664 Coils Coil 309 329 - -
Lele35g0110 664 CDD homeodomain 426 487 IPR001356 GO:0003677
Lele35g0110 664 SUPERFAMILY Homeodomain-like 428 493 IPR009057 -
Lele35g0110 664 SMART prehox3 228 377 IPR006563 -
Lele35g0110 664 MobiDBLite consensus disorder prediction 499 529 - -
Lele35g0110 664 SMART HOX_1 426 490 IPR001356 GO:0003677
Lele35g0110 664 MobiDBLite consensus disorder prediction 264 284 - -
Lele35g0110 664 MobiDBLite consensus disorder prediction 257 300 - -
Lele35g0110 664 Gene3D - 422 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0110 Lele-ChrLele35 685546 688507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0110 104 662 Homeobox Transcription Factor Family AT4G34610 45.122 3.96e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele35g0110 POX 4.3e-49 No_clan