Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0101 ATGAAGATACTTTGTGATGAGAGGAGAGCGTACGTGTTTTGCCAAGAGGACAGAGCGATATTATGCAGAGAATGTGACGTTCCGATTCACAGAGCGAGTGAACATACTCGGAAACATAACAGATTTCTTCTCACTGGTGTGAAGCTCTCTGCTTCTATCTCAAGCACTAATAACGAATCTCAATCTAACATGAAGAGACACAGATCATCATCATCACCGCCATCAGTTTTTAGTGGGAATGCCAGTTCTTCAATGGTGATGAATAGTTCCTTATTAGCCTCAGCGACAACTGGTTTTGGCAAAGTTGAAGATCAGTGCATAATAATTAGTGATACCAGTTCAGTTACAACAAGCAGCATTTCTGAATACTTGATCGAGAACATACCTGGTTATTGCTTTGAAGATCTTCTTGATGCTTCTTCACTCCCTCCACTTAATGGTTTCTGTAAGAAGTATGAGAACCTGCCAGCATTTGAGGAGCAGGATATTGAAGCAAATTGGCAATTTGCTGGTTGGATTTCAAGAAATGACTAA 534 0.4045 MKILCDERRAYVFCQEDRAILCRECDVPIHRASEHTRKHNRFLLTGVKLSASISSTNNESQSNMKRHRSSSSPPSVFSGNASSSMVMNSSLLASATTGFGKVEDQCIIISDTSSVTTSSISEYLIENIPGYCFEDLLDASSLPPLNGFCKKYENLPAFEEQDIEANWQFAGWISRND 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0101 177 SMART bboxneu5 5 44 IPR000315 GO:0008270
Lele35g0101 177 MobiDBLite consensus disorder prediction 55 78 - -
Lele35g0101 177 PANTHER B-BOX ZINC FINGER PROTEIN 22 5 158 - -
Lele35g0101 177 CDD Bbox1_BBX-like 4 44 - -
Lele35g0101 177 Pfam B-box zinc finger 5 37 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0101 Lele-ChrLele35 613523 614536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0101 4 141 C2C2-CO-like Transcription Factor Family AT4G39070 50.000 7.25e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele35g0101 zf-B_box 6.2e-06 No_clan