Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0091 ATGCGAACACTTTGTGATGTTTGTGAGAGCGCTGCAGCGATCATCTTCTGTGCTGCAGACGAGGCTGCTTTATGCCGTGCATGCGACGAAAAGGTCCATACATGCAACATGCTTGCTAGTAAACATGTGCGAGTTGGGCTGGCTGACCCCACTGATGTTCCCCACTGTGACATTTGTGAAAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGTTGTGTCTGCAATGTGACATGATAGTACATATTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAAAGAGTTGAGTTTCCAGGTGACAAACCTGGTCGATTGGAAGAACTAGGGCTGCAACCCCTTGTTCAAAATGAATTAAAGAAGGACCAAAGTCATCCCCTTAAGCTAATAACAAGAGATGGCCTGCATAACCATAGGGTCTCACCTGCTCCAATTCTAGAAAATAATGTTGGTGATCATGGAAAGATGGATAAAAAACTAATTGATCTTAATACTAGACCACAACGGTTAAATGGACCAACATCAGACAATCAGGAACTTGAACAGGAACCGGCCATGGATATTTCAAGTGGCAATAACAATGAATCTGTGGTTCCAGGAGAATCCTTCAAACGTGAGGCTGAGAAGAAATAA 648 0.429 MRTLCDVCESAAAIIFCAADEAALCRACDEKVHTCNMLASKHVRVGLADPTDVPHCDICENAPAFFYCEIDGSSLCLQCDMIVHIGGKRTHERYLLLRQRVEFPGDKPGRLEELGLQPLVQNELKKDQSHPLKLITRDGLHNHRVSPAPILENNVGDHGKMDKKLIDLNTRPQRLNGPTSDNQELEQEPAMDISSGNNNESVVPGESFKREAEKK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0091 215 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Lele35g0091 215 Pfam B-box zinc finger 53 93 IPR000315 GO:0008270
Lele35g0091 215 SMART bboxneu5 51 96 IPR000315 GO:0008270
Lele35g0091 215 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele35g0091 215 Gene3D Classic Zinc Finger 2 95 - -
Lele35g0091 215 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Lele35g0091 215 MobiDBLite consensus disorder prediction 172 204 - -
Lele35g0091 215 FunFam B-box zinc finger protein 19 2 92 - -
Lele35g0091 215 CDD Bbox1_BBX-like 56 96 - -
Lele35g0091 215 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 141 - -
Lele35g0091 215 MobiDBLite consensus disorder prediction 167 215 - -
Lele35g0091 215 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele35g0091 215 CDD Bbox1_BBX-like 4 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0091 Lele-ChrLele35 527855 529599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0091 1 214 C2C2-CO-like Transcription Factor Family AT4G38960 58.333 1.10e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lele35g0091 zf-B_box 5.4e-06 No_clan