Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0080 ATGCCAGCCACCGGAACCTGCAGCAAAATCCGCCAGATTGTTCAAATTCGGCAAATGCTTCTGCGATGGCGAAAGAAGGCATGTGCGACGGGGGCTAGATCGCCGTCGTCGGATGTTCCCGCCGGTCATGTGGCCGTGTGCGTAGGCGCTAGTAGGAGGAGGTTCATCGTGCGGACGACGTACCTTAACAACCCGATCTTCAAGAAGCTTCTGATGGAAGCGGAAGAGGAGTACGGCTTCTGCACGCAAGGTCCGTTAACGATCCCGTGCAACGAGTCGCTCTTCGAAGAGGCCCTGCGAGCCATGTCCCGATACCCGACCCGATACTTGAGCCTCGAGGATTTGCAGAAGCGTTGCCACGTGGATGCCTTCCGTAATTTTGATCCTGTTGGAGGAGAATCTTGGCCTTTGCTTCACGATGAGCCTATCTGCCGAAGCATGTTTCCGTTCTCCGTGAATTTTGGGGCTGTACACTATGCGGACTAG 486 0.5535 MPATGTCSKIRQIVQIRQMLLRWRKKACATGARSPSSDVPAGHVAVCVGASRRRFIVRTTYLNNPIFKKLLMEAEEEYGFCTQGPLTIPCNESLFEEALRAMSRYPTRYLSLEDLQKRCHVDAFRNFDPVGGESWPLLHDEPICRSMFPFSVNFGAVHYAD 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0080 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 99 IPR003676 GO:0009733
Lele35g0080 161 Pfam Auxin responsive protein 18 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0080 Lele-ChrLele35 457158 457643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0080 5 138 Calmodulin-binding Proteins AT4G34750 48.611 9.00e-39 127