Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0072 ATGGACTCAAATGAGGTTGATCCAAAGCTTCTTGTTCCTTTTGCAGTATTCATAATAGCCTTCCTCTTCTTAATGGTCACTGTGCCTCTCTCTGGAGGGCACATGAGCCCAGTCTTCACCTTCATCGCTGCCTTAAAGGGAGTCATAACACTCACACGTGCTCTCATTTACCTAATATCCCAATGCATTGGCTCCATTATTGGCTTTCTCATCATTCAGACTGTGATGGACAAAAGATTAGCACATATATATTCCTTAGGAGGCTGTGCTATCAGTGGTTTGAAGCAGCAAGAAGCTCTGTTATTAGAAGTTTGTTGCACTTTTGTGGTATTGTTTGTGGCAGTGACCATCGCTTTTGACAAGAGAAGGTCCGCGCAATTGGGGCTGCCAATGCTGTGTTTGGTGATTGCAGGAGGAATGGCGTTAGCTGTTTTTGTGTCTATTGTTGTGACTGGGCAGGCTGGATATGCTGGCGTGGGCCTAAACCCGGCAAGGTGTTTGGGCCCCGCGTTACTTCGGGGAGGCCCATTGTGGCATGGACATTGGGTCTTTTGGGTTGGGCCCTTCTTAGCCTGCATTCTCTATTATTTTGTCTCCATGAACCTACATAGGGAGGTTTTGGCTTGA 627 0.4689 MDSNEVDPKLLVPFAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALKGVITLTRALIYLISQCIGSIIGFLIIQTVMDKRLAHIYSLGGCAISGLKQQEALLLEVCCTFVVLFVAVTIAFDKRRSAQLGLPMLCLVIAGGMALAVFVSIVVTGQAGYAGVGLNPARCLGPALLRGGPLWHGHWVFWVGPFLACILYYFVSMNLHREVLA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0072 208 PRINTS Major intrinsic protein family signature 143 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0072 208 PRINTS Major intrinsic protein family signature 53 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0072 208 PRINTS Major intrinsic protein family signature 16 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0072 208 PRINTS Major intrinsic protein family signature 102 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0072 208 PRINTS Major intrinsic protein family signature 182 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0072 208 Pfam Major intrinsic protein 14 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele35g0072 208 Gene3D Glycerol uptake facilitator protein. 2 205 IPR023271 -
Lele35g0072 208 PANTHER AQUAPORIN-LIKE 2 205 - -
Lele35g0072 208 SUPERFAMILY Aquaporin-like 10 199 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0072 Lele-ChrLele35 409160 409786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0072 28 198 Major Intrinsic Protein MIP AT1G17810 32.000 6.19e-24 94.0