Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0065 ATGGATTGTACAGCTGCTAGAAAAACTCAAAAGGCTGATAGAGAAAAACTGAGGAGGGACCGGCTCAATGAACAGTTTGTAGAATTGGGTAGCATTTTAGATCCTGATAGGCCAAAAAATGACAAAGCAACCATTCTTGCTGATACAGTCCAATTGCTGAAGGACCTTACTTCGCAAGTTAGTAAACTCAAAGAGGAATATGCTATGCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAATGATCTTAGGGAAGAGAAGGCTTCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAGCAACGAGTCAGGACCATGTTCCCTTGGACTGCAATGGATCACTCAGTTATGATGGCCCCACCTTCATATCCATATCCAGTGCCAGTGCCAGTGCCAGTCCCTCCTGGTCCAATTCCCATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCCGTGTTCAACTTTCGTTCCTTATCTATCCCCTAATACTCTTGTTGAACATCAGTCCGCACAATATGTAACCCCCACACTTCCTCCAGGTAGCCATTCCCATGCGACAGGATCACAAGATTCCAGAAACAAATCATCCAAGGAGAGCAAGGTTGAAAATGATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTACGACAGATCTGGAGTTGTCATCTGGGCAAAGAAAATCCAGCAGGTTGTCCACGAACACAGAAGGGAGTTCATTCGGCAGGTGTTCTTCCTCTCACAGCGTACAGGATAGCTCATCAAGTAGCGTAGTTGGGAGCAGAAAAGCTAATGAATGA 843 0.4484 MDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTVQLLKDLTSQVSKLKEEYAMLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRVRTMFPWTAMDHSVMMAPPSYPYPVPVPVPVPPGPIPMQPYPFFANQNPGVIPNPCSTFVPYLSPNTLVEHQSAQYVTPTLPPGSHSHATGSQDSRNKSSKESKVENDECANDVTTDLELKTPGSTTDLELSSGQRKSSRLSTNTEGSSFGRCSSSHSVQDSSSSSVVGSRKANE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0065 280 MobiDBLite consensus disorder prediction 182 280 - -
Lele35g0065 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 77 IPR036638 GO:0046983
Lele35g0065 280 MobiDBLite consensus disorder prediction 223 280 - -
Lele35g0065 280 MobiDBLite consensus disorder prediction 182 199 - -
Lele35g0065 280 CDD bHLH_AtILR3_like 11 85 - -
Lele35g0065 280 PANTHER TRANSCRIPTION FACTOR BHLH121 2 278 IPR044579 GO:0003700|GO:0055072
Lele35g0065 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Lele35g0065 280 Coils Coil 5 25 - -
Lele35g0065 280 MobiDBLite consensus disorder prediction 200 220 - -
Lele35g0065 280 Coils Coil 46 101 - -
Lele35g0065 280 SMART finulus 12 62 IPR011598 GO:0046983
Lele35g0065 280 Gene3D - 5 89 IPR036638 GO:0046983
Lele35g0065 280 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0065 Lele-ChrLele35 383836 385271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0065 1 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 62.083 3.68e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele35g0065 HLH 1.3e-09 No_clan