Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0050 ATGCTGCCAGCAGCTGCCGGCGCACATGTTATAGACGGTGACGCCGTCGCAAGCAATGATGACGGGGAGAAGGCGGGTGTCGTTGTGGGTCAGGCCGGAGATCAATCTCGTGATCATCTCCTTAATCAAGACTTTTCCCTCGGAGTAATCGGGGTCATCCTTCTGGATCACCACTTTGACTGGGAGGGGACCGGGTGGTCTATTGGCGAAGGTTTGGTAGCTCTCGATGACCTTCCACCATGTGGCAACGTTGGGCATGGTCGCCCTTTCAGCGTTGATGGACTTGATGAAGGCCAGAATCTTGTTCCTCTGCACCTTGGTGACGTTGCCATACCACAAAATGGCGAGGTCGATGTTGCCGGTGAGCAGATCGCCGTCGTTGTAAACGAGGGGAGAGCAACAAAGGGAGGTACAGGTAAAAAAGCCCCACCCGAGGAAGCTCGCTGCCAAGGAGCACCACAAAGTTGCGATAATTTGATGGATGGTTCTTCTGAAGAAGAGGGTCACAAAGCAATGAGGAAAGAGATGTCCTTTCTTGCCCAACCGCGATGCCTCCTTTTATTCCTCGTTCTTTCAGTTTTTCTGATTTTCGCCTTCTCTGTCTCTAAGCGGGTTGAGGCGAAACCAGAAGAGGAGCCTGAAATTACACACAGAGTATTCTTGGATGTTGATGTCGATGACCAACGATTAGGTAGGATCATTATTGGATTATATGGCCAAGTTGTACCAAAAACTGCGGAGAATTTCAGAGTTTTGTGCACAGGGGAGAAAGGCAAGAGTTCCAATGGAATAAAACTTCATTATAAAGGAACGCCATTTCATCGCATAATATCTGGTTTCGTGATTCAGGGCGGAGACATTGTTCATAAAGATGGCAGTGGATATGAATCTATTTACGGTGGCACCTTTCCTGATGAGAATTTCAGGATAAAACATTCACATGCTGGGGTTGTCTCTATGGTGAATTCTGGACCTGATTCGAATGGCTCACAGCTTTTTATCACCACCGTGAAGGCTAGCTGGTTGGATGGAGAACACGTTGTATTTGGGAAGGTAATAGAAGGTATGGATAGTGTGTTTGCCATAGAAGGGGGTGCCGGAACCTACAGTGGTAAACCTAGAAAGAAAGTAGTAATATCCGACTCCGGAGAGATACCACGGAGCCAGTGGGAGGAGCAAGGGCGAATTTCCTTGGCACAGTGA 1203 0.4846 MLPAAAGAHVIDGDAVASNDDGEKAGVVVGQAGDQSRDHLLNQDFSLGVIGVILLDHHFDWEGTGWSIGEGLVALDDLPPCGNVGHGRPFSVDGLDEGQNLVPLHLGDVAIPQNGEVDVAGEQIAVVVNEGRATKGGTGKKAPPEEARCQGAPQSCDNLMDGSSEEEGHKAMRKEMSFLAQPRCLLLFLVLSVFLIFAFSVSKRVEAKPEEEPEITHRVFLDVDVDDQRLGRIIIGLYGQVVPKTAENFRVLCTGEKGKSSNGIKLHYKGTPFHRIISGFVIQGGDIVHKDGSGYESIYGGTFPDENFRIKHSHAGVVSMVNSGPDSNGSQLFITTVKASWLDGEHVVFGKVIEGMDSVFAIEGGAGTYSGKPRKKVVISDSGEIPRSQWEEQGRISLAQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0050 400 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 220 384 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 MobiDBLite consensus disorder prediction 133 164 - -
Lele35g0050 400 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 218 385 - -
Lele35g0050 400 FunFam Peptidyl-prolyl cis-trans isomerase 205 391 - -
Lele35g0050 400 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 223 381 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 237 252 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 331 343 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 273 285 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 344 359 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 316 331 IPR002130 GO:0000413|GO:0003755
Lele35g0050 400 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 268 285 IPR020892 GO:0003755|GO:0006457
Lele35g0050 400 Gene3D - 205 391 IPR029000 -
Lele35g0050 400 SUPERFAMILY Cyclophilin-like 214 385 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0050 Lele-ChrLele35 323771 329700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0050 231 379 U-box Gene Family AT5G67530 41.333 1.68e-23 100