Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0040 ATGCGAAAACACCAAGATGACCTCGATCTCGACCTCCTCCTTTCCCTTCAAGACAGAGTCTTGGAAACCCCTCCGACTTCTCCCTCACGCCATTCACCGGGTTACTTATCCGACGATGGCTCGCGAAGGCAAAGGGAGACGGCTGACATGTCGGTGTTTAGAAATGCTGTTCAGGATTGTCTTGAAGTCGAAACCAAATCAAATAAAAAGCCCGAGAAGTTGAATGGACCGGTGAACAAGAAATCAAATCATACTGAGGTCGAGAAGTTTTCTGGGCTGCGCATAAGGAAACAATTGGTAACCTCTGCAGAGCTCAGTGAACGCTTTTCAGACGTTCGTTTCGTTCGGCTACCAGTAATCAAGAATTTGCTGACAGGGGATACTATTTCTGGATGTTGGGCGACGGTTGGAGTACTGACAGAGAAAGGGAGTTCAAAGAAAAGTTCGACTGGGAAGAGCTTCTGTATATGGAAAATTGGGTGTTTGGATGAAAGTAATATTTCTCTTTTCTTGTTCGGCGATGCGTATAAGAGTAACTCGCAAGAACATGCGGGGACGGTCTTTGCATTGTTTAACTGTTCAGTACGAAAGGATGCTATGGGTAATGGTTTTTCATTGAGTGCATATTCCCCAAGTCAAATTCTGAAGATAGGAACTTCTGTTGATTACGGAGTTTGCAAGGGAAAACGAAACGATGGGCTGCCCTGTACGCTGGTTATAAATATACGTCAAGGGACACACTGTAAATATCATAAATCGAAATCATCACAAGAGTACTCCACAATGCGAACTGAACTCAAGGGAGGGAACTTAAGAACAGCATTTAGGCCTAGGGATTATCTCAAGTCAGAAGGAATTCACTTAGTTGATCCTGTTATTGGCAAAACAAACCCAACGAAACCTCAGCCACTGAAATTGTTGTCAGTGGATGCTCTTAAAAAGGCATTGAGCAATGCAGGCAAAGTGACAACAAATAAGCATTCGCAAGGGATAAGATTTCTTTCAGAGATCACAGGCAAGCCGGACTCTAAGGCAGTGAAGAGAAAACAAATGATGCCAAATGAACAAAGCAAGTGCACTGATAAGAGGAAACCGTCTTCGGTAAAAGAGGGATCCCCTGAAACAAGAGACAGACATTTAGGTGCCAAAAGAATAAAATCTGAAGGGCAAGCATCGGGTGATAAAACCATGGGGGGTAGTGGAAAGATGATTGAATTAGACCTTGTTAGTTCAGATGACGACATCTGA 1248 0.4367 MRKHQDDLDLDLLLSLQDRVLETPPTSPSRHSPGYLSDDGSRRQRETADMSVFRNAVQDCLEVETKSNKKPEKLNGPVNKKSNHTEVEKFSGLRIRKQLVTSAELSERFSDVRFVRLPVIKNLLTGDTISGCWATVGVLTEKGSSKKSSTGKSFCIWKIGCLDESNISLFLFGDAYKSNSQEHAGTVFALFNCSVRKDAMGNGFSLSAYSPSQILKIGTSVDYGVCKGKRNDGLPCTLVINIRQGTHCKYHKSKSSQEYSTMRTELKGGNLRTAFRPRDYLKSEGIHLVDPVIGKTNPTKPQPLKLLSVDALKKALSNAGKVTTNKHSQGIRFLSEITGKPDSKAVKRKQMMPNEQSKCTDKRKPSSVKEGSPETRDRHLGAKRIKSEGQASGDKTMGGSGKMIELDLVSSDDDI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0040 415 MobiDBLite consensus disorder prediction 341 390 - -
Lele35g0040 415 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
Lele35g0040 415 MobiDBLite consensus disorder prediction 335 415 - -
Lele35g0040 415 FunFam DNA replication licensing factor mcm10 79 253 - -
Lele35g0040 415 MobiDBLite consensus disorder prediction 64 83 - -
Lele35g0040 415 MobiDBLite consensus disorder prediction 21 47 - -
Lele35g0040 415 Gene3D - 78 252 IPR012340 -
Lele35g0040 415 PANTHER PROTEIN MCM10 HOMOLOG 25 387 IPR040184 GO:0003690|GO:0003697|GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0040 Lele-ChrLele35 279421 282258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0040 19 414 Core DNA Replication Machinery Family AT2G20980 54.000 1.18e-135 392