LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele35g0015	ATGTGGAGCATATACAGTATTAGTTTTACAAGCGAGTTGGTTCTCCTGATTGATCATGATGGTCTTCACCGCCATATTAGATTCCGGATCTTAAATTTTGACGCATTTCAATTAAATGCGGGATTGCTGGAACTTCCTAATACTCACCATAATACATGGGATACCATAAGAGTGCCCTCCTATGCTGTTGCTGCTCAGTGGGATGAAGCAGTGGTAAAGGTGAAAACAGGAAAGGCGACTTCGCTTGGGAAGCAGAATTTCCTGATCTCCAAGATTATTAGCTTGAAATTCTGGGCATGCGGGTATGGCTCCTTGGCGTTGGAATTAAGTGGTGGACACCTTGCAGCCGGTGTTCCTTCCTTGTACAAAAATGGAGCCGGTTGTGGTAGCAGAGTTGTTTTGAGCGATCTCAATACCCACAATGAAACTGATTTGTGCTCAGCAGAAGTGCCTTCGTTGCCATGGCTAAGAAGGGGTAGAGGTGAACAAGTTTTGAAGCTCGGAATCTTGGATGTGGAATATAAGAGAGTTGCGCGTGAGTACAAAAACAGGAATTTGGCGGTGAGGGAGGAAGAATCAAGCAAGAAACCATATTACTTGGCAATTAAATTTTTGTATGAAGGAGGTCAAACTGAGATAGTAGGCGTAGACGTTGCAGAGGTAGGATCATCAGACTGGAGCTTCATGAGAAGACACCATGGAGCAGTGTGGGACACGAGTAGGGTTCCAGAAGGGGAATTCCAGATGAGGATGAAGGTGACATCATGGTACGACGGGAAATGGATGTGGGCAAAGAAGGCCTACTTTCCAAAGTGGAACCATATCATTTCCCATCCTGATTGGCCGAAAAGATTGCTTATCACTTGCTCTGCTTCCAGAAGAGCTCAGCTGGCCATGGCCGCCGGAGCTACCACCCCCAAATGGGTCACCCGAGCTAAATCAGGAAAACGCAGCTTCATGATTTTTGCACCCTCCAAGTCAAGCAGGCAATCCCTCCGTTTTAAGCTTCATCACAGGCCTAAATTCAAGGCATGCTCTCTTTCCCTCAATGGTTGCAGACCTCAAGGAGCAGTTCAGCATCCGACAATCCCAGTTGGCACCATTGATTCACGCACTCTTCCCTCAGTTGCATCGCCGGCGATGGCCATGGACGCCCTCGACTCCGCCGTCTCCCACCTCATTTCCCAACCTCCTCTTTCTACCTCCGGCATAATCCGCCTCCAGGTGGCGATCGAAGATCAGATTGAGGCTATTGATTGGTTCCACTCCCAATCCGAACTTTTGCTTCCTCGCTGCTTTTTCTCAGGTCGAGCGACGCATCCCTCTCTTGGAAATGGTCACAGTTCAATGTCTATGGCATACGAGCACAAATTGGTTAGCGTTGCCGGTGTCGGTTCCGCCATCTTCTTCCGGCAGCCACATCCTTTTTCTTACGACGATTGGCTTTCCATCAAAAGGTTTCTTTCTGAGAGATGCCCATTAATCCGAGCTTATGGAGCTATACGTTTCAATCCCAAAGCTAAGGTGTCACCCGAGTGGCTGCCTTTTGGTTCTTTTTACTTCATGATTCCTCAGGTCGAGTTTGATGAGCTTGAAGGAACGTCGATGATTGCTGCAACTATTGCGTGGGATGATGCTCTTTCCTGGTCATGGGAAAACGCAATCAATGCACTCCGAGCAACACTTTGCAAGGTTTCTTCTTTCATTGTGAAGTTTCCAAAACAAGCTCCTCGAACATCCATAATAATCAGTCATAACTTTCCTGCTAAGGTAGAATGGGATCTTGCTGTTAACAGAGCTTTGCAGATGATACAGAAGAACCACTCCTTACTAACCAAGGTTGTGCTGGCTCGAAGTACCAGAGTAGTGCCTACTGCTGACATTGATCCTCTTTCGTGGTTAGCATCCTTACAGGTCGAAGGTGCAGATGCTTACCAGTTTTTCCTACAGCCGCCAAATGCACCGGCCTTCATTGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTTCACATAACTAGTGAAGCCTTGGCTGGAACCCGCGCAAGAGGTGCAACAACAGCACTAGATCATCAAATCGCACTAGATTTACTTTCCAGTCCAAAGGAGGATATGGAGTTCACTATAGTCAGAGAGACTATAAGAAGTAAATTGGAGGCAGTATGTGAGAATGTACTGGTGAAACCAAGCAAAGCAGTAAGAAAACTCCCAAGGATCCAACATTTATTTGCTCAATTAGCCGGCAGGTTAAGAAGTGAAGAAGATGAGTTTGAAATTTTGTCATCACTTCATCCAAGTCCTGCAGTTTGTGGGTTTCCAACAGAAGAGGCTCAAATGTTAATTGCAGAGACAGAAGTATTTGATCGAGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGTGGTGAGAGTGAGTTTGCTGTTGGCATCAGGTCAGCTTTGGTGGAAAAGGATATGGGAGCATGGATATATGCTGGAACAGGTATAGTGGAAGGAAGCAATCCTTACTTAGAGTGGGATGAGCTAGAACTCAAGTCATCTCAGTTCACCAAGTTGCTCAAACTCGACGTGCCTCAAAGACAAAAGGTTGATTCATATGAGCATTGA	2610	0.4632	MWSIYSISFTSELVLLIDHDGLHRHIRFRILNFDAFQLNAGLLELPNTHHNTWDTIRVPSYAVAAQWDEAVVKVKTGKATSLGKQNFLISKIISLKFWACGYGSLALELSGGHLAAGVPSLYKNGAGCGSRVVLSDLNTHNETDLCSAEVPSLPWLRRGRGEQVLKLGILDVEYKRVAREYKNRNLAVREEESSKKPYYLAIKFLYEGGQTEIVGVDVAEVGSSDWSFMRRHHGAVWDTSRVPEGEFQMRMKVTSWYDGKWMWAKKAYFPKWNHIISHPDWPKRLLITCSASRRAQLAMAAGATTPKWVTRAKSGKRSFMIFAPSKSSRQSLRFKLHHRPKFKACSLSLNGCRPQGAVQHPTIPVGTIDSRTLPSVASPAMAMDALDSAVSHLISQPPLSTSGIIRLQVAIEDQIEAIDWFHSQSELLLPRCFFSGRATHPSLGNGHSSMSMAYEHKLVSVAGVGSAIFFRQPHPFSYDDWLSIKRFLSERCPLIRAYGAIRFNPKAKVSPEWLPFGSFYFMIPQVEFDELEGTSMIAATIAWDDALSWSWENAINALRATLCKVSSFIVKFPKQAPRTSIIISHNFPAKVEWDLAVNRALQMIQKNHSLLTKVVLARSTRVVPTADIDPLSWLASLQVEGADAYQFFLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGATTALDHQIALDLLSSPKEDMEFTIVRETIRSKLEAVCENVLVKPSKAVRKLPRIQHLFAQLAGRLRSEEDEFEILSSLHPSPAVCGFPTEEAQMLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDMGAWIYAGTGIVEGSNPYLEWDELELKSSQFTKLLKLDVPQRQKVDSYEH	869

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele35g0015	869	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	97	184	IPR007112	-
	Lele35g0015	869	Gene3D	-	181	275	IPR036749	-
	Lele35g0015	869	TIGRFAM	isochor_syn: isochorismate synthase	496	853	IPR004561	GO:0008909\|GO:0009058
	Lele35g0015	869	Pfam	Expansin C-terminal domain	191	265	IPR007117	-
	Lele35g0015	869	FunFam	isochorismate synthase, chloroplastic-like isoform X1	382	856	-	-
	Lele35g0015	869	PANTHER	-	341	862	IPR044250	GO:0008909
	Lele35g0015	869	SUPERFAMILY	ADC synthase	448	858	IPR005801	GO:0009058
	Lele35g0015	869	ProSiteProfiles	Expansin, Cellulose-binding-like domain profile.	198	273	IPR007117	-
	Lele35g0015	869	SUPERFAMILY	Barwin-like endoglucanases	99	182	IPR036908	-
	Lele35g0015	869	SUPERFAMILY	PHL pollen allergen	184	272	IPR036749	-
	Lele35g0015	869	Gene3D	Anthranilate synthase	382	856	IPR005801	GO:0009058
	Lele35g0015	869	Pfam	chorismate binding enzyme	592	846	IPR015890	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele35g0015	Lele-ChrLele35	122809	131763	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele35g0015	102	273	Expansin Gene Family	AT3G45960	48.691	1.60e-52	182